RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 PNMA8AQ86V59 439 aaPredicted RBP13.96□□□□□ -0.17
SNCA-207ENST00000502987 GPC2Q8N158 579 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
SNCA-207ENST00000502987 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 ANKRD36CQ5JPF3 1778 aa13.96□□□□□ -0.18
SNCA-207ENST00000502987 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
SNCA-207ENST00000502987 LRP10Q7Z4F1 713 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 NIM1KQ8IY84 436 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 CHPF2Q9P2E5 772 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
SNCA-207ENST00000502987 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
SNCA-207ENST00000502987 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
SNCA-207ENST00000502987 COL13A1Q5TAT6 717 aaPredicted RBP13.94□□□□□ -0.18
SNCA-207ENST00000502987 ATP6V0A2Q9Y487 856 aa13.94□□□□□ -0.18
SNCA-207ENST00000502987 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 BBOX1O75936 387 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 AOC3Q16853 763 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 MAP1SQ66K74 1059 aaPredicted RBP13.93□□□□□ -0.18
SNCA-207ENST00000502987 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
SNCA-207ENST00000502987 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 CNTROBQ8N137 903 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 SUPT20HQ8NEM7 779 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
SNCA-207ENST00000502987 DBF4Q9UBU7 674 aaPredicted RBP13.93□□□□□ -0.18
SNCA-207ENST00000502987 LAMB2P55268 1798 aa13.93□□□□□ -0.18
SNCA-207ENST00000502987 ABCC4O15439 1325 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 TMEM88BA6NKF7 163 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 DUSP27Q5VZP5 1158 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 MPNDQ8N594 471 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 PLBD2Q8NHP8 589 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
SNCA-207ENST00000502987 TAF1P21675 1872 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 ELL2O00472 640 aaPredicted RBP13.91□□□□□ -0.18
SNCA-207ENST00000502987 APAF1O14727 1248 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
SNCA-207ENST00000502987 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
SNCA-207ENST00000502987 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
SNCA-207ENST00000502987 HOXB7P09629 217 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 EPS15P42566 896 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
SNCA-207ENST00000502987 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 MBIPQ9NS73 344 aa13.9□□□□□ -0.18
SNCA-207ENST00000502987 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
SNCA-207ENST00000502987 COL4A5P29400 1685 aa13.89□□□□□ -0.19
SNCA-207ENST00000502987 GNAI1P63096 354 aa13.89□□□□□ -0.19
SNCA-207ENST00000502987 GRAPQ13588 217 aa13.89□□□□□ -0.19
SNCA-207ENST00000502987 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
SNCA-207ENST00000502987 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
SNCA-207ENST00000502987 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
SNCA-207ENST00000502987 CNTNAP1P78357 1384 aa13.88□□□□□ -0.19
SNCA-207ENST00000502987 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
SNCA-207ENST00000502987 ABT1Q9ULW3 272 aaKnown RBP13.88□□□□□ -0.19
SNCA-207ENST00000502987 RAD17O75943 681 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 VEGFBP49765 207 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 SCNN1DP51172 638 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 CXCL9Q07325 125 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 DEFB115Q30KQ5 88 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 CIAPIN1Q6FI81 312 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 USP50Q70EL3 339 aaPredicted RBP13.87□□□□□ -0.19
SNCA-207ENST00000502987 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 AIDAQ96BJ3 306 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
SNCA-207ENST00000502987 C6orf229H3BNL8 230 aa13.86□□□□□ -0.19
SNCA-207ENST00000502987 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 TNIP1Q15025 636 aa13.86□□□□□ -0.19
SNCA-207ENST00000502987 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 MIER1Q8N108 512 aa13.86□□□□□ -0.19
SNCA-207ENST00000502987 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 ADARB2Q9NS39 739 aaKnown RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
SNCA-207ENST00000502987 NSFL1CQ9UNZ2 370 aaKnown RBP13.86□□□□□ -0.19
SNCA-207ENST00000502987 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
SNCA-207ENST00000502987 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
SNCA-207ENST00000502987 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
SNCA-207ENST00000502987 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
SNCA-207ENST00000502987 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 GRM1Q13255 1194 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 MYD88Q99836 296 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 GPRC5DQ9NZD1 345 aa13.85□□□□□ -0.19
SNCA-207ENST00000502987 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms