RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 CIAPIN1Q6FI81 312 aa18.03■□□□□ 0.48
DDR1-247ENST00000502955 MPNDQ8N594 471 aa18.03■□□□□ 0.48
DDR1-247ENST00000502955 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
DDR1-247ENST00000502955 ANXA1P04083 346 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 TCIRG1Q13488 830 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 GRAPQ13588 217 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 TNIP1Q15025 636 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.48
DDR1-247ENST00000502955 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
DDR1-247ENST00000502955 GRAPLQ8TC17 118 aaPredicted RBP18.02■□□□□ 0.48
DDR1-247ENST00000502955 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
DDR1-247ENST00000502955 DUOX1Q9NRD9 1551 aa18.01■□□□□ 0.47
DDR1-247ENST00000502955 CA12O43570 354 aa18.01■□□□□ 0.47
DDR1-247ENST00000502955 CELF2O95319 508 aaKnown RBP18.01■□□□□ 0.47
DDR1-247ENST00000502955 HCLS1P14317 486 aaPredicted RBP18.01■□□□□ 0.47
DDR1-247ENST00000502955 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
DDR1-247ENST00000502955 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
DDR1-247ENST00000502955 TMPOP42166 694 aaKnown RBP18■□□□□ 0.47
DDR1-247ENST00000502955 HIRAP54198 1017 aaPredicted RBP18■□□□□ 0.47
DDR1-247ENST00000502955 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
DDR1-247ENST00000502955 AOC2O75106 756 aa17.99■□□□□ 0.47
DDR1-247ENST00000502955 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
DDR1-247ENST00000502955 GRM1Q13255 1194 aa17.99■□□□□ 0.47
DDR1-247ENST00000502955 CDC37L1Q7L3B6 337 aa17.99■□□□□ 0.47
DDR1-247ENST00000502955 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
DDR1-247ENST00000502955 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
DDR1-247ENST00000502955 TAF1P21675 1872 aa17.99■□□□□ 0.47
DDR1-247ENST00000502955 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
DDR1-247ENST00000502955 YDJCA8MPS7 323 aa17.98■□□□□ 0.47
DDR1-247ENST00000502955 RAD17O75943 681 aa17.98■□□□□ 0.47
DDR1-247ENST00000502955 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
DDR1-247ENST00000502955 RGS19P49795 217 aa17.97■□□□□ 0.47
DDR1-247ENST00000502955 TRPM4Q8TD43 1214 aa17.97■□□□□ 0.47
DDR1-247ENST00000502955 DPF2Q92785 391 aa17.97■□□□□ 0.47
DDR1-247ENST00000502955 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
DDR1-247ENST00000502955 H7C1D1 291 aa17.96■□□□□ 0.47
DDR1-247ENST00000502955 CHL1O00533 1208 aa17.96■□□□□ 0.47
DDR1-247ENST00000502955 RALBP1Q15311 655 aa17.96■□□□□ 0.47
DDR1-247ENST00000502955 FAM161AQ3B820 660 aa17.96■□□□□ 0.47
DDR1-247ENST00000502955 HOXB7P09629 217 aa17.95■□□□□ 0.46
DDR1-247ENST00000502955 SF3B3Q15393 1217 aaKnown RBP17.95■□□□□ 0.46
DDR1-247ENST00000502955 NECTIN2Q92692 538 aa17.95■□□□□ 0.46
DDR1-247ENST00000502955 NOGQ13253 232 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 WASHC4Q2M389 1173 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 MICALL2Q8IY33 904 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 ISCA1Q9BUE6 129 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 TSKSQ9UJT2 592 aa17.94■□□□□ 0.46
DDR1-247ENST00000502955 SHTN1A0MZ66 631 aa17.93■□□□□ 0.46
DDR1-247ENST00000502955 RPS12P25398 132 aaKnown RBP17.93■□□□□ 0.46
DDR1-247ENST00000502955 KRT24Q2M2I5 525 aa17.93■□□□□ 0.46
DDR1-247ENST00000502955 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
DDR1-247ENST00000502955 ZNF408Q9H9D4 720 aa17.93■□□□□ 0.46
DDR1-247ENST00000502955 CCDC85CA6NKD9 419 aa17.92■□□□□ 0.46
DDR1-247ENST00000502955 PSMD14O00487 310 aa17.92■□□□□ 0.46
DDR1-247ENST00000502955 MLLT1Q03111 559 aaPredicted RBP17.92■□□□□ 0.46
DDR1-247ENST00000502955 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
DDR1-247ENST00000502955 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
DDR1-247ENST00000502955 CASP8AP2Q9UKL3 1982 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 SLC34A2O95436 690 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
DDR1-247ENST00000502955 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 MCOLN1Q9GZU1 580 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
DDR1-247ENST00000502955 NSFL1CQ9UNZ2 370 aaKnown RBP17.91■□□□□ 0.46
DDR1-247ENST00000502955 TRIM35Q9UPQ4 493 aa17.91■□□□□ 0.46
DDR1-247ENST00000502955 HUNKP57058 714 aa17.9■□□□□ 0.46
DDR1-247ENST00000502955 SAMD7Q7Z3H4 446 aa17.9■□□□□ 0.46
DDR1-247ENST00000502955 DBNDD1Q9H9R9 158 aa17.9■□□□□ 0.46
DDR1-247ENST00000502955 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
DDR1-247ENST00000502955 COL4A1P02462 1669 aa17.9■□□□□ 0.46
DDR1-247ENST00000502955 POLR2AP24928 1970 aaKnown RBP17.9■□□□□ 0.46
DDR1-247ENST00000502955 EYA3Q99504 573 aa17.89■□□□□ 0.45
DDR1-247ENST00000502955 HYPKQ9NX55 129 aa17.89■□□□□ 0.45
DDR1-247ENST00000502955 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
DDR1-247ENST00000502955 FAM155AB1AL88 458 aaPredicted RBP17.88■□□□□ 0.45
DDR1-247ENST00000502955 ECE2O60344 883 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 EGFRP00533 1210 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 GPSM2P81274 684 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 KRT26Q7Z3Y9 468 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 ZIC5Q96T25 663 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 SAGE1Q9NXZ1 904 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 PODXL2Q9NZ53 605 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 ZNF609O15014 1411 aa17.88■□□□□ 0.45
DDR1-247ENST00000502955 ATP5J2-PTCD1G3V325 749 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 RPS8P62241 208 aaKnown RBP17.87■□□□□ 0.45
DDR1-247ENST00000502955 NEUROD2Q15784 382 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 TBC1D10BQ4KMP7 808 aaPredicted RBP17.87■□□□□ 0.45
DDR1-247ENST00000502955 RGMBQ6NW40 437 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 TBC1D16Q8TBP0 767 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 DCPSQ96C86 337 aaKnown RBP17.87■□□□□ 0.45
DDR1-247ENST00000502955 CFAP44Q96MT7 982 aa17.87■□□□□ 0.45
DDR1-247ENST00000502955 GBA2Q9HCG7 927 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms