RNA–Protein interactions for RNA: ENST00000502727.5

PRDM2-212, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-212ENST00000502727 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
PRDM2-212ENST00000502727 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
PRDM2-212ENST00000502727 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
PRDM2-212ENST00000502727 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
PRDM2-212ENST00000502727 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 TIAM2Q8IVF5 1701 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 NFKBIEO00221 500 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 SEC24BO95487 1268 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 NTSR2O95665 410 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 C7orf43Q8WVR3 580 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
PRDM2-212ENST00000502727 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 LAMB2P55268 1798 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
PRDM2-212ENST00000502727 RNF123Q5XPI4 1314 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 KIF3CO14782 793 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 PLCG2P16885 1265 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 PRELPP51888 382 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 SLC10A5Q5PT55 438 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
PRDM2-212ENST00000502727 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
PRDM2-212ENST00000502727 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
PRDM2-212ENST00000502727 HOXA10P31260 410 aaPredicted RBP12.92□□□□□ -0.34
PRDM2-212ENST00000502727 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
PRDM2-212ENST00000502727 SPRYD3Q8NCJ5 442 aa12.92□□□□□ -0.34
PRDM2-212ENST00000502727 IL16Q14005 1332 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
PRDM2-212ENST00000502727 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 TAF1P21675 1872 aa12.91□□□□□ -0.34
PRDM2-212ENST00000502727 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
PRDM2-212ENST00000502727 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
PRDM2-212ENST00000502727 CCDC30Q5VVM6 783 aa12.9□□□□□ -0.34
PRDM2-212ENST00000502727 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
PRDM2-212ENST00000502727 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
PRDM2-212ENST00000502727 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
PRDM2-212ENST00000502727 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
PRDM2-212ENST00000502727 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
PRDM2-212ENST00000502727 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
PRDM2-212ENST00000502727 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
PRDM2-212ENST00000502727 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
PRDM2-212ENST00000502727 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
PRDM2-212ENST00000502727 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
PRDM2-212ENST00000502727 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
PRDM2-212ENST00000502727 TOMM70O94826 608 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRDM2-212ENST00000502727 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
PRDM2-212ENST00000502727 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
PRDM2-212ENST00000502727 PHAXQ9H814 394 aaKnown RBP12.88□□□□□ -0.35
PRDM2-212ENST00000502727 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
PRDM2-212ENST00000502727 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
PRDM2-212ENST00000502727 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
PRDM2-212ENST00000502727 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-212ENST00000502727 WDR90Q96KV7 1748 aa12.87□□□□□ -0.35
PRDM2-212ENST00000502727 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 DDX58O95786 925 aaKnown RBP12.86□□□□□ -0.35
PRDM2-212ENST00000502727 HCLS1P14317 486 aaPredicted RBP12.86□□□□□ -0.35
PRDM2-212ENST00000502727 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
PRDM2-212ENST00000502727 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
PRDM2-212ENST00000502727 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 PSMD1Q99460 953 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
PRDM2-212ENST00000502727 SNED1Q8TER0 1413 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 MYH3P11055 1940 aa12.86□□□□□ -0.35
PRDM2-212ENST00000502727 SCN4AP35499 1836 aa12.85□□□□□ -0.35
PRDM2-212ENST00000502727 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
PRDM2-212ENST00000502727 HSPA6P17066 643 aa12.85□□□□□ -0.35
PRDM2-212ENST00000502727 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
PRDM2-212ENST00000502727 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
PRDM2-212ENST00000502727 FANCIQ9NVI1 1328 aa12.85□□□□□ -0.35
PRDM2-212ENST00000502727 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 BBOX1O75936 387 aa12.84□□□□□ -0.35
PRDM2-212ENST00000502727 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 DDX46Q7L014 1031 aaKnown RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
PRDM2-212ENST00000502727 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
PRDM2-212ENST00000502727 ABCC4O15439 1325 aa12.84□□□□□ -0.35
PRDM2-212ENST00000502727 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
PRDM2-212ENST00000502727 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
PRDM2-212ENST00000502727 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
PRDM2-212ENST00000502727 ZBTB38Q8NAP3 1195 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms