RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 CLUAP1Q96AJ1 413 aa22.51■■□□□ 1.19
CCHCR1-216ENST00000502557 USP44Q9H0E7 712 aa22.51■■□□□ 1.19
CCHCR1-216ENST00000502557 GRAPQ13588 217 aa22.5■■□□□ 1.19
CCHCR1-216ENST00000502557 GRAPLQ8TC17 118 aaPredicted RBP22.5■■□□□ 1.19
CCHCR1-216ENST00000502557 CCDC85AQ96PX6 553 aaPredicted RBP22.5■■□□□ 1.19
CCHCR1-216ENST00000502557 DDX60Q8IY21 1712 aaKnown RBP22.5■■□□□ 1.19
CCHCR1-216ENST00000502557 BRCA1P38398 1863 aaKnown RBP22.49■■□□□ 1.19
CCHCR1-216ENST00000502557 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
CCHCR1-216ENST00000502557 FOXO4P98177 505 aa22.49■■□□□ 1.19
CCHCR1-216ENST00000502557 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
CCHCR1-216ENST00000502557 SEC31BQ9NQW1 1179 aa22.49■■□□□ 1.19
CCHCR1-216ENST00000502557 BBOX1O75936 387 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 CSF1RP07333 972 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 EPHA10Q5JZY3 1008 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 SLC51AQ86UW1 340 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 SUCLG2Q96I99 432 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 GREM2Q9H772 168 aa22.48■■□□□ 1.19
CCHCR1-216ENST00000502557 SOGA3Q5TF21 947 aa22.47■■□□□ 1.19
CCHCR1-216ENST00000502557 KAZALD1Q96I82 304 aa22.47■■□□□ 1.19
CCHCR1-216ENST00000502557 LAMB2P55268 1798 aa22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 CCDC93Q567U6 631 aa22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 DZIP1LQ8IYY4 767 aaKnown RBP22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 TMEM57Q8N5G2 664 aa22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 ATP6V0A2Q9Y487 856 aa22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 RTL9Q8NET4 1388 aa22.46■■□□□ 1.19
CCHCR1-216ENST00000502557 NFKBIEO00221 500 aa22.45■■□□□ 1.18
CCHCR1-216ENST00000502557 RLBP1P12271 317 aa22.45■■□□□ 1.18
CCHCR1-216ENST00000502557 RPS8P62241 208 aaKnown RBP22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 RASSF7Q02833 373 aa22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 FAM161AQ3B820 660 aa22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 CC2D2BQ6DHV5 1058 aa22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 LMBR1LQ6UX01 489 aa22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 FTSJ3Q8IY81 847 aaKnown RBP22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 MEIS3Q99687 375 aa22.44■■□□□ 1.18
CCHCR1-216ENST00000502557 SLX4Q8IY92 1834 aa22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 COL4A1P02462 1669 aa22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 PLIN1O60240 522 aa22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 TMC4Q7Z404 712 aa22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 SP8Q8IXZ3 490 aa22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 BICC1Q9H694 974 aaKnown RBP22.43■■□□□ 1.18
CCHCR1-216ENST00000502557 SNED1Q8TER0 1413 aa22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 UBTFL1P0CB47 393 aaPredicted RBP22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 ITGA6P23229 1130 aa22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 RTKN2Q8IZC4 609 aa22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 ANKRD44Q8N8A2 993 aa22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
CCHCR1-216ENST00000502557 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 ANKRD18AQ8IVF6 992 aa22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 PANK1Q8TE04 598 aa22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 CHMP3Q9Y3E7 222 aa22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 ARFGEF1Q9Y6D6 1849 aa22.41■■□□□ 1.18
CCHCR1-216ENST00000502557 PRELPP51888 382 aa22.4■■□□□ 1.18
CCHCR1-216ENST00000502557 TAOK3Q9H2K8 898 aa22.4■■□□□ 1.18
CCHCR1-216ENST00000502557 ANKRD18BA2A2Z9 1011 aa22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 GNAI3P08754 354 aa22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 MS4A1P11836 297 aa22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 FKBP4Q02790 459 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 ITPRIPQ8IWB1 547 aa22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 TMX4Q9H1E5 349 aaPredicted RBP22.39■■□□□ 1.17
CCHCR1-216ENST00000502557 IFIT5Q13325 482 aaKnown RBP22.38■■□□□ 1.17
CCHCR1-216ENST00000502557 C9orf131Q5VYM1 1079 aa22.38■■□□□ 1.17
CCHCR1-216ENST00000502557 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.38■■□□□ 1.17
CCHCR1-216ENST00000502557 LRRFIP2Q9Y608 721 aaKnown RBP22.38■■□□□ 1.17
CCHCR1-216ENST00000502557 PSMD1Q99460 953 aa22.37■■□□□ 1.17
CCHCR1-216ENST00000502557 BSDC1Q9NW68 430 aaPredicted RBP22.37■■□□□ 1.17
CCHCR1-216ENST00000502557 HDAC5Q9UQL6 1122 aa22.37■■□□□ 1.17
CCHCR1-216ENST00000502557 LMNB1P20700 586 aa22.36■■□□□ 1.17
CCHCR1-216ENST00000502557 IGHMBP2P38935 993 aaKnown RBP22.36■■□□□ 1.17
CCHCR1-216ENST00000502557 CCDC57Q2TAC2 916 aa22.36■■□□□ 1.17
CCHCR1-216ENST00000502557 MPNDQ8N594 471 aa22.36■■□□□ 1.17
CCHCR1-216ENST00000502557 GPSM2P81274 684 aa22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 C20orf194Q5TEA3 1177 aa22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 ZNF594Q96JF6 807 aaPredicted RBP22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 RNF181Q9P0P0 153 aa22.35■■□□□ 1.17
CCHCR1-216ENST00000502557 ZBTB7BO15156 539 aaPredicted RBP22.34■■□□□ 1.17
CCHCR1-216ENST00000502557 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
CCHCR1-216ENST00000502557 NSFL1CQ9UNZ2 370 aaKnown RBP22.34■■□□□ 1.17
CCHCR1-216ENST00000502557 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
CCHCR1-216ENST00000502557 MVPQ14764 893 aaKnown RBP22.33■■□□□ 1.17
CCHCR1-216ENST00000502557 MPHOSPH8Q99549 860 aa22.33■■□□□ 1.17
CCHCR1-216ENST00000502557 MINPP1Q9UNW1 487 aa22.33■■□□□ 1.17
CCHCR1-216ENST00000502557 GNAI2P04899 355 aa22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 YY1P25490 414 aa22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 RRP1P56182 461 aaKnown RBP22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 TAF7LQ5H9L4 462 aa22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 PODXL2Q9NZ53 605 aa22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
CCHCR1-216ENST00000502557 IARSP41252 1262 aaKnown RBP22.31■■□□□ 1.16
CCHCR1-216ENST00000502557 RFX5P48382 616 aaPredicted RBP22.31■■□□□ 1.16
CCHCR1-216ENST00000502557 SUPT20HQ8NEM7 779 aa22.31■■□□□ 1.16
CCHCR1-216ENST00000502557 CACNA1SQ13698 1873 aa22.3■■□□□ 1.16
CCHCR1-216ENST00000502557 LDHAL6AQ6ZMR3 332 aa22.3■■□□□ 1.16
CCHCR1-216ENST00000502557 ANKIB1Q9P2G1 1089 aa22.3■■□□□ 1.16
CCHCR1-216ENST00000502557 POLLQ9UGP5 575 aa22.3■■□□□ 1.16
CCHCR1-216ENST00000502557 GOLGB1Q14789 3259 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms