RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
LMNA-218ENST00000502357 CCDC85CA6NKD9 419 aa16.79■□□□□ 0.28
LMNA-218ENST00000502357 GRM1Q13255 1194 aa16.79■□□□□ 0.28
LMNA-218ENST00000502357 ZC3H15Q8WU90 426 aaKnown RBP16.79■□□□□ 0.28
LMNA-218ENST00000502357 MCOLN1Q9GZU1 580 aa16.79■□□□□ 0.28
LMNA-218ENST00000502357 TNRC18O15417 2968 aaPredicted RBP16.78■□□□□ 0.28
LMNA-218ENST00000502357 BBOX1O75936 387 aa16.78■□□□□ 0.28
LMNA-218ENST00000502357 ANXA1P04083 346 aa16.78■□□□□ 0.28
LMNA-218ENST00000502357 BRPF1P55201 1214 aaPredicted RBP16.78■□□□□ 0.28
LMNA-218ENST00000502357 MLLT1Q03111 559 aaPredicted RBP16.78■□□□□ 0.28
LMNA-218ENST00000502357 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
LMNA-218ENST00000502357 UTP14AQ9BVJ6 771 aaKnown RBP16.78■□□□□ 0.28
LMNA-218ENST00000502357 POLR2AP24928 1970 aaKnown RBP16.77■□□□□ 0.28
LMNA-218ENST00000502357 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
LMNA-218ENST00000502357 NLRP10Q86W26 655 aa16.77■□□□□ 0.28
LMNA-218ENST00000502357 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
LMNA-218ENST00000502357 CA12O43570 354 aa16.76■□□□□ 0.27
LMNA-218ENST00000502357 RAD17O75943 681 aa16.76■□□□□ 0.27
LMNA-218ENST00000502357 MPNDQ8N594 471 aa16.76■□□□□ 0.27
LMNA-218ENST00000502357 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
LMNA-218ENST00000502357 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
LMNA-218ENST00000502357 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
LMNA-218ENST00000502357 EGFRP00533 1210 aa16.75■□□□□ 0.27
LMNA-218ENST00000502357 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
LMNA-218ENST00000502357 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
LMNA-218ENST00000502357 CDC37L1Q7L3B6 337 aa16.75■□□□□ 0.27
LMNA-218ENST00000502357 GRAPQ13588 217 aa16.74■□□□□ 0.27
LMNA-218ENST00000502357 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
LMNA-218ENST00000502357 CNOT7Q9UIV1 285 aaKnown RBP16.74■□□□□ 0.27
LMNA-218ENST00000502357 TCIRG1Q13488 830 aa16.73■□□□□ 0.27
LMNA-218ENST00000502357 TNIP1Q15025 636 aa16.73■□□□□ 0.27
LMNA-218ENST00000502357 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
LMNA-218ENST00000502357 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
LMNA-218ENST00000502357 EIF2S2P20042 333 aaKnown RBP16.72■□□□□ 0.27
LMNA-218ENST00000502357 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
LMNA-218ENST00000502357 DPF2Q92785 391 aa16.72■□□□□ 0.27
LMNA-218ENST00000502357 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
LMNA-218ENST00000502357 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 NOGQ13253 232 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 SAMD7Q7Z3H4 446 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 XAGE3Q8WTP9 111 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 RTL9Q8NET4 1388 aa16.71■□□□□ 0.27
LMNA-218ENST00000502357 PSMD14O00487 310 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 ZNF408Q9H9D4 720 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
LMNA-218ENST00000502357 HUNKP57058 714 aa16.69■□□□□ 0.26
LMNA-218ENST00000502357 DGKZQ13574 1117 aa16.69■□□□□ 0.26
LMNA-218ENST00000502357 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
LMNA-218ENST00000502357 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
LMNA-218ENST00000502357 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
LMNA-218ENST00000502357 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
LMNA-218ENST00000502357 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
LMNA-218ENST00000502357 TMX4Q9H1E5 349 aaPredicted RBP16.68■□□□□ 0.26
LMNA-218ENST00000502357 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
LMNA-218ENST00000502357 PDE4DIPQ5VU43 2346 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 H7C1D1 291 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
LMNA-218ENST00000502357 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 DBNDD1Q9H9R9 158 aa16.67■□□□□ 0.26
LMNA-218ENST00000502357 ADM5C9JUS6 153 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 CHL1O00533 1208 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
LMNA-218ENST00000502357 RIPK4P57078 832 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 GPSM2P81274 684 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
LMNA-218ENST00000502357 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 GBA2Q9HCG7 927 aaPredicted RBP16.66■□□□□ 0.26
LMNA-218ENST00000502357 SAGE1Q9NXZ1 904 aa16.66■□□□□ 0.26
LMNA-218ENST00000502357 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
LMNA-218ENST00000502357 NEFMP07197 916 aa16.65■□□□□ 0.26
LMNA-218ENST00000502357 KIF23Q02241 960 aaPredicted RBP16.65■□□□□ 0.26
LMNA-218ENST00000502357 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
LMNA-218ENST00000502357 KRT26Q7Z3Y9 468 aa16.65■□□□□ 0.26
LMNA-218ENST00000502357 RNF186Q9NXI6 227 aa16.65■□□□□ 0.26
LMNA-218ENST00000502357 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
LMNA-218ENST00000502357 RPS12P25398 132 aaKnown RBP16.64■□□□□ 0.25
LMNA-218ENST00000502357 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
LMNA-218ENST00000502357 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
LMNA-218ENST00000502357 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
LMNA-218ENST00000502357 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
LMNA-218ENST00000502357 PSME4Q14997 1843 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 ZNF609O15014 1411 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 ECE2O60344 883 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 SLC10A3P09131 477 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
LMNA-218ENST00000502357 AKAP11Q9UKA4 1901 aa16.62■□□□□ 0.25
LMNA-218ENST00000502357 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms