RNA–Protein interactions for RNA: ENST00000502279.2

CHFR-207, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 1,423 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-207ENST00000502279 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
CHFR-207ENST00000502279 BCS1LQ9Y276 419 aa17.2■□□□□ 0.34
CHFR-207ENST00000502279 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
CHFR-207ENST00000502279 CTSWP56202 376 aa17.19■□□□□ 0.34
CHFR-207ENST00000502279 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
CHFR-207ENST00000502279 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
CHFR-207ENST00000502279 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
CHFR-207ENST00000502279 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
CHFR-207ENST00000502279 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
CHFR-207ENST00000502279 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
CHFR-207ENST00000502279 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
CHFR-207ENST00000502279 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
CHFR-207ENST00000502279 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
CHFR-207ENST00000502279 GRIN3BO60391 1043 aa17.17■□□□□ 0.34
CHFR-207ENST00000502279 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
CHFR-207ENST00000502279 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
CHFR-207ENST00000502279 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
CHFR-207ENST00000502279 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
CHFR-207ENST00000502279 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
CHFR-207ENST00000502279 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
CHFR-207ENST00000502279 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
CHFR-207ENST00000502279 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.34
CHFR-207ENST00000502279 GRAPQ13588 217 aa17.14■□□□□ 0.33
CHFR-207ENST00000502279 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
CHFR-207ENST00000502279 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
CHFR-207ENST00000502279 TTLL11Q8NHH1 800 aa17.14■□□□□ 0.33
CHFR-207ENST00000502279 GRAPLQ8TC17 118 aaPredicted RBP17.14■□□□□ 0.33
CHFR-207ENST00000502279 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
CHFR-207ENST00000502279 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
CHFR-207ENST00000502279 MS4A1P11836 297 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 C7orf43Q8WVR3 580 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 CSF1RP07333 972 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 FOXO4P98177 505 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
CHFR-207ENST00000502279 C21orf2O43822 256 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 BBOX1O75936 387 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 RLBP1P12271 317 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
CHFR-207ENST00000502279 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 GREM2Q9H772 168 aa17.12■□□□□ 0.33
CHFR-207ENST00000502279 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 UBTFL1P0CB47 393 aaPredicted RBP17.11■□□□□ 0.33
CHFR-207ENST00000502279 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
CHFR-207ENST00000502279 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
CHFR-207ENST00000502279 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
CHFR-207ENST00000502279 MEIS3Q99687 375 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
CHFR-207ENST00000502279 GNAI3P08754 354 aa17.1■□□□□ 0.33
CHFR-207ENST00000502279 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
CHFR-207ENST00000502279 CCDC85AQ96PX6 553 aaPredicted RBP17.1■□□□□ 0.33
CHFR-207ENST00000502279 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
CHFR-207ENST00000502279 BICC1Q9H694 974 aaKnown RBP17.09■□□□□ 0.33
CHFR-207ENST00000502279 NFKBIEO00221 500 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 ITGA6P23229 1130 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
CHFR-207ENST00000502279 PDE3AQ14432 1141 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 LMBR1LQ6UX01 489 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 PANK1Q8TE04 598 aa17.08■□□□□ 0.32
CHFR-207ENST00000502279 PLIN1O60240 522 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
CHFR-207ENST00000502279 PSME4Q14997 1843 aa17.07■□□□□ 0.32
CHFR-207ENST00000502279 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
CHFR-207ENST00000502279 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
CHFR-207ENST00000502279 IFIT5Q13325 482 aaKnown RBP17.06■□□□□ 0.32
CHFR-207ENST00000502279 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
CHFR-207ENST00000502279 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
CHFR-207ENST00000502279 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
CHFR-207ENST00000502279 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHFR-207ENST00000502279 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
CHFR-207ENST00000502279 SLC51AQ86UW1 340 aa17.05■□□□□ 0.32
CHFR-207ENST00000502279 PSMD1Q99460 953 aa17.05■□□□□ 0.32
CHFR-207ENST00000502279 IGHMBP2P38935 993 aaKnown RBP17.04■□□□□ 0.32
CHFR-207ENST00000502279 RASSF7Q02833 373 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 BSDC1Q9NW68 430 aaPredicted RBP17.04■□□□□ 0.32
CHFR-207ENST00000502279 DDX19BQ9UMR2 479 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
CHFR-207ENST00000502279 GNAI2P04899 355 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 MTX1Q13505 466 aa17.04■□□□□ 0.32
CHFR-207ENST00000502279 COL4A5P29400 1685 aa17.03■□□□□ 0.32
CHFR-207ENST00000502279 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
CHFR-207ENST00000502279 LMNB1P20700 586 aa17.03■□□□□ 0.32
CHFR-207ENST00000502279 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
CHFR-207ENST00000502279 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms