RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 GPR108Q9NPR9 543 aa22.18■■□□□ 1.14
LINC00535-201ENST00000501400 SCN7AQ01118 1682 aa22.17■■□□□ 1.14
LINC00535-201ENST00000501400 SPRYD3Q8NCJ5 442 aa22.17■■□□□ 1.14
LINC00535-201ENST00000501400 CCDC85AQ96PX6 553 aaPredicted RBP22.17■■□□□ 1.14
LINC00535-201ENST00000501400 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
LINC00535-201ENST00000501400 PALD1Q9ULE6 856 aa22.17■■□□□ 1.14
LINC00535-201ENST00000501400 IRS4O14654 1257 aaPredicted RBP22.16■■□□□ 1.14
LINC00535-201ENST00000501400 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
LINC00535-201ENST00000501400 ATP5JP18859 108 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 CTSWP56202 376 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 CCDC57Q2TAC2 916 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 RIC1Q4ADV7 1423 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 KCNQ4P56696 695 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 CWC27Q6UX04 472 aaKnown RBP22.16■■□□□ 1.14
LINC00535-201ENST00000501400 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
LINC00535-201ENST00000501400 RAD50Q92878 1312 aa22.15■■□□□ 1.14
LINC00535-201ENST00000501400 K7ELQ4 463 aaPredicted RBP22.15■■□□□ 1.14
LINC00535-201ENST00000501400 IL17RAQ96F46 866 aa22.15■■□□□ 1.14
LINC00535-201ENST00000501400 LSG1Q9H089 658 aaKnown RBP22.15■■□□□ 1.14
LINC00535-201ENST00000501400 DIAPH3Q9NSV4 1193 aa22.15■■□□□ 1.14
LINC00535-201ENST00000501400 TAF1LQ8IZX4 1826 aa22.15■■□□□ 1.14
LINC00535-201ENST00000501400 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.14
LINC00535-201ENST00000501400 GREM2Q9H772 168 aa22.14■■□□□ 1.14
LINC00535-201ENST00000501400 FBXO3Q9UK99 471 aa22.14■■□□□ 1.14
LINC00535-201ENST00000501400 CNTNAP4Q9C0A0 1308 aa22.14■■□□□ 1.14
LINC00535-201ENST00000501400 SUSD4Q5VX71 490 aa22.14■■□□□ 1.13
LINC00535-201ENST00000501400 EDC3Q96F86 508 aaKnown RBP22.14■■□□□ 1.13
LINC00535-201ENST00000501400 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
LINC00535-201ENST00000501400 PDE8AO60658 829 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 DDIT3P35638 169 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 TRPC5Q9UL62 973 aaPredicted RBP22.12■■□□□ 1.13
LINC00535-201ENST00000501400 ITGA6P23229 1130 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 HSPA4P34932 840 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 ANAPC15P60006 121 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 NFKBIBQ15653 356 aa22.12■■□□□ 1.13
LINC00535-201ENST00000501400 MCCP23508 829 aa22.11■■□□□ 1.13
LINC00535-201ENST00000501400 TIMM10P62072 90 aa22.11■■□□□ 1.13
LINC00535-201ENST00000501400 NDUFB9Q9Y6M9 179 aa22.11■■□□□ 1.13
LINC00535-201ENST00000501400 A0A1B0GUL7 405 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 HAUS7Q99871 368 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 FSD1Q9BTV5 496 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 NTSR2O95665 410 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 NMIQ13287 307 aaPredicted RBP22.1■■□□□ 1.13
LINC00535-201ENST00000501400 PARP10Q53GL7 1025 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 RUFY2Q8WXA3 655 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 SNRKQ9NRH2 765 aa22.1■■□□□ 1.13
LINC00535-201ENST00000501400 CASZ1Q86V15 1759 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 RFX7Q2KHR2 1363 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 SEPT12Q8IYM1 358 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 NEUROD6Q96NK8 337 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 SPEF2Q9C093 1822 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
LINC00535-201ENST00000501400 EP400Q96L91 3159 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 A0A0D9SFI3 127 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 HIP1O00291 1037 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 AK7Q96M32 723 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 UTP14AQ9BVJ6 771 aaKnown RBP22.08■■□□□ 1.13
LINC00535-201ENST00000501400 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 NIP7Q9Y221 180 aaKnown RBP eCLIP22.08■■□□□ 1.13
LINC00535-201ENST00000501400 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
LINC00535-201ENST00000501400 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.12
LINC00535-201ENST00000501400 ANKRD18BA2A2Z9 1011 aa22.08■■□□□ 1.12
LINC00535-201ENST00000501400 HCLS1P14317 486 aaPredicted RBP22.07■■□□□ 1.12
LINC00535-201ENST00000501400 PTH1RQ03431 593 aa22.07■■□□□ 1.12
LINC00535-201ENST00000501400 COL24A1Q17RW2 1714 aa22.07■■□□□ 1.12
LINC00535-201ENST00000501400 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
LINC00535-201ENST00000501400 DNAJC2Q99543 621 aaKnown RBP22.07■■□□□ 1.12
LINC00535-201ENST00000501400 C4AP0C0L4 1744 aa22.06■■□□□ 1.12
LINC00535-201ENST00000501400 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
LINC00535-201ENST00000501400 FAM177BA6PVY3 158 aa22.06■■□□□ 1.12
LINC00535-201ENST00000501400 ST18O60284 1047 aa22.06■■□□□ 1.12
LINC00535-201ENST00000501400 RC3H1Q5TC82 1133 aaKnown RBP22.06■■□□□ 1.12
LINC00535-201ENST00000501400 ZNF652Q9Y2D9 606 aa22.06■■□□□ 1.12
LINC00535-201ENST00000501400 ARAP2Q8WZ64 1704 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 COL4A1P02462 1669 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 ADORA1P30542 326 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 CLEC4GQ6UXB4 293 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 LDHAL6AQ6ZMR3 332 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 KIAA1211Q6ZU35 1233 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 VGLL2Q8N8G2 317 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 CHMP5Q9NZZ3 219 aa22.05■■□□□ 1.12
LINC00535-201ENST00000501400 CCNL1Q9UK58 526 aaPredicted RBP22.05■■□□□ 1.12
LINC00535-201ENST00000501400 DDX46Q7L014 1031 aaKnown RBP22.04■■□□□ 1.12
LINC00535-201ENST00000501400 BCL2L12Q9HB09 334 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 SNX14Q9Y5W7 946 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 CHGBP05060 677 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 AMIGO3Q86WK7 504 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 RASEFQ8IZ41 740 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 AKAP2Q9Y2D5 859 aa22.04■■□□□ 1.12
LINC00535-201ENST00000501400 FRAT2O75474 233 aaPredicted RBP22.03■■□□□ 1.12
LINC00535-201ENST00000501400 RPS6KA4O75676 772 aa22.03■■□□□ 1.12
LINC00535-201ENST00000501400 NEK4P51957 841 aa22.03■■□□□ 1.12
LINC00535-201ENST00000501400 ZNF589Q86UQ0 364 aaPredicted RBP22.03■■□□□ 1.12
LINC00535-201ENST00000501400 XAGE2Q96GT9 111 aa22.03■■□□□ 1.12
LINC00535-201ENST00000501400 QTRT2Q9H974 415 aaKnown RBP22.03■■□□□ 1.12
LINC00535-201ENST00000501400 RGL2O15211 777 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms