RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 CEP85Q6P2H3 762 aa13.55□□□□□ -0.24
GPATCH4-210ENST00000498756 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
GPATCH4-210ENST00000498756 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
GPATCH4-210ENST00000498756 COL4A1P02462 1669 aa13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 CTSWP56202 376 aa13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 GREM2Q9H772 168 aa13.54□□□□□ -0.24
GPATCH4-210ENST00000498756 NPHP1O15259 732 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 IGHDP01880 384 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 NEFLP07196 543 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 CHRNA5P30532 468 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 ST5P78524 1137 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 ANKRD31Q8N7Z5 1873 aa13.53□□□□□ -0.24
GPATCH4-210ENST00000498756 A0A0G2JLW4 131 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 KCNA3P22001 575 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 MTX1Q13505 466 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 POLA2Q14181 598 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.25
GPATCH4-210ENST00000498756 TGFB2P61812 414 aa13.51□□□□□ -0.25
GPATCH4-210ENST00000498756 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
GPATCH4-210ENST00000498756 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
GPATCH4-210ENST00000498756 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
GPATCH4-210ENST00000498756 CHMP3Q9Y3E7 222 aa13.51□□□□□ -0.25
GPATCH4-210ENST00000498756 RIC1Q4ADV7 1423 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 SRGNP10124 158 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 DPEP1P16444 411 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 ITGA6P23229 1130 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 CHMP4BQ9H444 224 aaKnown RBP13.5□□□□□ -0.25
GPATCH4-210ENST00000498756 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 PDE6BP35913 854 aa13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 LAMB2P55268 1798 aa13.49□□□□□ -0.25
GPATCH4-210ENST00000498756 TAF1P21675 1872 aa13.48□□□□□ -0.25
GPATCH4-210ENST00000498756 KIF13BQ9NQT8 1826 aa13.48□□□□□ -0.25
GPATCH4-210ENST00000498756 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
GPATCH4-210ENST00000498756 WTIPA6NIX2 430 aaPredicted RBP13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 H0YIN7 160 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 AAMPQ13685 434 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 OLFM4Q6UX06 510 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 ATG9AQ7Z3C6 839 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.258e-7■■■□□ 14.9
GPATCH4-210ENST00000498756 SIL1Q9H173 461 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 HDAC5Q9UQL6 1122 aa13.47□□□□□ -0.25
GPATCH4-210ENST00000498756 RTL9Q8NET4 1388 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 NPR1P16066 1061 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 RPGRQ92834 1020 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 COPRSQ9NQ92 184 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 EXOC6BQ9Y2D4 811 aa13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-210ENST00000498756 KIAA1551Q9HCM1 1747 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 GRAPQ13588 217 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 ERICH6BQ5W0A0 696 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 PPP4R2Q9NY27 417 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
GPATCH4-210ENST00000498756 SNAP23O00161 211 aa13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 SASH1O94885 1247 aa13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 C7orf43Q8WVR3 580 aa13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 PIM2Q9P1W9 311 aa13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
GPATCH4-210ENST00000498756 MYH3P11055 1940 aa13.43□□□□□ -0.26
GPATCH4-210ENST00000498756 EYA2O00167 538 aa13.43□□□□□ -0.26
GPATCH4-210ENST00000498756 APBB1O00213 710 aa13.43□□□□□ -0.26
GPATCH4-210ENST00000498756 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
GPATCH4-210ENST00000498756 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
GPATCH4-210ENST00000498756 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms