RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 C7orf43Q8WVR3 580 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
PRKCB-210ENST00000498739 GOLGB1Q14789 3259 aaKnown RBP21.19■□□□□ 0.98
PRKCB-210ENST00000498739 CCDC93Q567U6 631 aa21.19■□□□□ 0.98
PRKCB-210ENST00000498739 YY1P25490 414 aa21.18■□□□□ 0.98
PRKCB-210ENST00000498739 PLA2G12BQ9BX93 195 aa21.18■□□□□ 0.98
PRKCB-210ENST00000498739 NFKBIEO00221 500 aa21.17■□□□□ 0.98
PRKCB-210ENST00000498739 BBOX1O75936 387 aa21.17■□□□□ 0.98
PRKCB-210ENST00000498739 CCT4P50991 539 aaKnown RBP21.17■□□□□ 0.98
PRKCB-210ENST00000498739 TTLL11Q8NHH1 800 aa21.17■□□□□ 0.98
PRKCB-210ENST00000498739 CELF1Q92879 486 aaKnown RBP21.17■□□□□ 0.98
PRKCB-210ENST00000498739 SEC31BQ9NQW1 1179 aa21.17■□□□□ 0.98
PRKCB-210ENST00000498739 TRIM27P14373 513 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 ATF7IPQ6VMQ6 1270 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 SLC51AQ86UW1 340 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
PRKCB-210ENST00000498739 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 CHD4Q14839 1912 aa21.16■□□□□ 0.98
PRKCB-210ENST00000498739 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
PRKCB-210ENST00000498739 CC2D2BQ6DHV5 1058 aa21.15■□□□□ 0.98
PRKCB-210ENST00000498739 TAOK3Q9H2K8 898 aa21.15■□□□□ 0.98
PRKCB-210ENST00000498739 ATP6V0A2Q9Y487 856 aa21.15■□□□□ 0.98
PRKCB-210ENST00000498739 COL4A1P02462 1669 aa21.15■□□□□ 0.98
PRKCB-210ENST00000498739 UTYO14607 1347 aa21.14■□□□□ 0.97
PRKCB-210ENST00000498739 C9orf131Q5VYM1 1079 aa21.14■□□□□ 0.97
PRKCB-210ENST00000498739 RTKN2Q8IZC4 609 aa21.14■□□□□ 0.97
PRKCB-210ENST00000498739 CLUAP1Q96AJ1 413 aa21.14■□□□□ 0.97
PRKCB-210ENST00000498739 GREM2Q9H772 168 aa21.14■□□□□ 0.97
PRKCB-210ENST00000498739 FER1L6Q2WGJ9 1857 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 RPS8P62241 208 aaKnown RBP21.13■□□□□ 0.97
PRKCB-210ENST00000498739 FOXO4P98177 505 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 SP8Q8IXZ3 490 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 SUCLG2Q96I99 432 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 RNF181Q9P0P0 153 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 RCAN3Q9UKA8 241 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 MYH3P11055 1940 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 TAF1P21675 1872 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 UTRNP46939 3433 aa21.13■□□□□ 0.97
PRKCB-210ENST00000498739 CSF1RP07333 972 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 LMNB1P20700 586 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 PRELPP51888 382 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 FKBP4Q02790 459 aaKnown RBP eCLIP21.12■□□□□ 0.97
PRKCB-210ENST00000498739 EPHA10Q5JZY3 1008 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 CDC5LQ99459 802 aaKnown RBP21.12■□□□□ 0.97
PRKCB-210ENST00000498739 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 CHMP3Q9Y3E7 222 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
PRKCB-210ENST00000498739 RTL9Q8NET4 1388 aa21.11■□□□□ 0.97
PRKCB-210ENST00000498739 FAM161AQ3B820 660 aa21.11■□□□□ 0.97
PRKCB-210ENST00000498739 INTS3Q68E01 1043 aaKnown RBP21.11■□□□□ 0.97
PRKCB-210ENST00000498739 ANKRD18AQ8IVF6 992 aa21.11■□□□□ 0.97
PRKCB-210ENST00000498739 ITGA6P23229 1130 aa21.1■□□□□ 0.97
PRKCB-210ENST00000498739 GRIPAP1Q4V328 841 aa21.1■□□□□ 0.97
PRKCB-210ENST00000498739 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
PRKCB-210ENST00000498739 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
PRKCB-210ENST00000498739 KAZALD1Q96I82 304 aa21.09■□□□□ 0.97
PRKCB-210ENST00000498739 PSMD1Q99460 953 aa21.09■□□□□ 0.97
PRKCB-210ENST00000498739 ANKRD18BA2A2Z9 1011 aa21.08■□□□□ 0.97
PRKCB-210ENST00000498739 LRRC37AA6NMS7 1700 aa21.08■□□□□ 0.97
PRKCB-210ENST00000498739 UBTFL1P0CB47 393 aaPredicted RBP21.08■□□□□ 0.97
PRKCB-210ENST00000498739 DPP8Q6V1X1 898 aaPredicted RBP21.08■□□□□ 0.97
PRKCB-210ENST00000498739 MPNDQ8N594 471 aa21.08■□□□□ 0.97
PRKCB-210ENST00000498739 TMEM57Q8N5G2 664 aa21.08■□□□□ 0.97
PRKCB-210ENST00000498739 BICC1Q9H694 974 aaKnown RBP21.08■□□□□ 0.97
PRKCB-210ENST00000498739 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
PRKCB-210ENST00000498739 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
PRKCB-210ENST00000498739 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
PRKCB-210ENST00000498739 DZIP1LQ8IYY4 767 aaKnown RBP21.07■□□□□ 0.96
PRKCB-210ENST00000498739 SBF1O95248 1867 aa21.07■□□□□ 0.96
PRKCB-210ENST00000498739 CCDC57Q2TAC2 916 aa21.06■□□□□ 0.96
PRKCB-210ENST00000498739 MEIS3Q99687 375 aa21.06■□□□□ 0.96
PRKCB-210ENST00000498739 NSFL1CQ9UNZ2 370 aaKnown RBP21.06■□□□□ 0.96
PRKCB-210ENST00000498739 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
PRKCB-210ENST00000498739 GPSM2P81274 684 aa21.05■□□□□ 0.96
PRKCB-210ENST00000498739 ANKRD44Q8N8A2 993 aa21.05■□□□□ 0.96
PRKCB-210ENST00000498739 SUPT20HQ8NEM7 779 aa21.05■□□□□ 0.96
PRKCB-210ENST00000498739 TIAM2Q8IVF5 1701 aa21.04■□□□□ 0.96
PRKCB-210ENST00000498739 RABL6Q3YEC7 729 aaPredicted RBP21.04■□□□□ 0.96
PRKCB-210ENST00000498739 TAF7LQ5H9L4 462 aa21.04■□□□□ 0.96
PRKCB-210ENST00000498739 MPHOSPH8Q99549 860 aa21.04■□□□□ 0.96
PRKCB-210ENST00000498739 BSDC1Q9NW68 430 aaPredicted RBP21.04■□□□□ 0.96
PRKCB-210ENST00000498739 SPEF2Q9C093 1822 aa21.04■□□□□ 0.96
PRKCB-210ENST00000498739 GNAI3P08754 354 aa21.03■□□□□ 0.96
PRKCB-210ENST00000498739 RLBP1P12271 317 aa21.03■□□□□ 0.96
PRKCB-210ENST00000498739 RTFDC1Q9BY42 306 aaPredicted RBP21.03■□□□□ 0.96
PRKCB-210ENST00000498739 ANKIB1Q9P2G1 1089 aa21.03■□□□□ 0.96
PRKCB-210ENST00000498739 HDAC5Q9UQL6 1122 aa21.03■□□□□ 0.96
PRKCB-210ENST00000498739 DUOX1Q9NRD9 1551 aa21.02■□□□□ 0.96
PRKCB-210ENST00000498739 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
PRKCB-210ENST00000498739 PLIN1O60240 522 aa21.02■□□□□ 0.96
PRKCB-210ENST00000498739 ITPRIPQ8IWB1 547 aa21.02■□□□□ 0.96
PRKCB-210ENST00000498739 ZNF594Q96JF6 807 aaPredicted RBP21.02■□□□□ 0.96
PRKCB-210ENST00000498739 LRRFIP2Q9Y608 721 aaKnown RBP21.02■□□□□ 0.96
PRKCB-210ENST00000498739 CCDC88AQ3V6T2 1871 aa21.02■□□□□ 0.96
PRKCB-210ENST00000498739 ZC3H4Q9UPT8 1303 aaKnown RBP21.02■□□□□ 0.95
PRKCB-210ENST00000498739 C6orf229H3BNL8 230 aa21.01■□□□□ 0.95
PRKCB-210ENST00000498739 MS4A1P11836 297 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms