RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PNKPQ96T60 521 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 ACBD3Q9H3P7 528 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 PARP3Q9Y6F1 533 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 ELP1O95163 1332 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 NRDCO43847 1150 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 ECEL1O95672 775 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 FBLN1P23142 703 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 USP4Q13107 963 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.26
PBX1-211ENST00000498497 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.26
PBX1-211ENST00000498497 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
PBX1-211ENST00000498497 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
PBX1-211ENST00000498497 GSPT2Q8IYD1 628 aaKnown RBP13.45□□□□□ -0.26
PBX1-211ENST00000498497 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 TMEM165Q9HC07 324 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 IQCA1Q86XH1 822 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
PBX1-211ENST00000498497 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
PBX1-211ENST00000498497 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 KCNB2Q92953 911 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 TBC1D31Q96DN5 1066 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 UBXN6Q9BZV1 441 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 PYGLP06737 847 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 TERF2IPQ9NYB0 399 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 MYBL2P10244 700 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 PDHBP11177 359 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 GPR161Q8N6U8 529 aaKnown RBP13.44□□□□□ -0.26
PBX1-211ENST00000498497 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 SIL1Q9H173 461 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
PBX1-211ENST00000498497 ZEB2O60315 1214 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 HNRNPMP52272 730 aaKnown RBP eCLIP13.43□□□□□ -0.26
PBX1-211ENST00000498497 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 AFAP1L1Q8TED9 768 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 GOLGA1Q92805 767 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 CABS1Q96KC9 395 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 NUCKS1Q9H1E3 243 aaKnown RBP13.43□□□□□ -0.26
PBX1-211ENST00000498497 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 NEMFO60524 1076 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 HMOX1P09601 288 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 HDXQ7Z353 690 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 ANKRD18AQ8IVF6 992 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
PBX1-211ENST00000498497 GPTP24298 496 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 PDE1AP54750 535 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 CASP8Q14790 479 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 VPS53Q5VIR6 699 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 NBPF5PQ86XG9 351 aaPredicted RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 MEIS3Q99687 375 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 CCDC181Q5TID7 509 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 JAKMIP1Q96N16 626 aaKnown RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 CCDC141Q6ZP82 1450 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 ROCK1Q13464 1354 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 EVC2Q86UK5 1308 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 KIAA0754O94854 1291 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 ATP1A3P13637 1013 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 VSNL1P62760 191 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 MRPS25P82663 173 aaKnown RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 FAM160A1Q05DH4 1040 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 IQCB1Q15051 598 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 SPATS2LQ9NUQ6 558 aaKnown RBP13.42□□□□□ -0.26
PBX1-211ENST00000498497 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
PBX1-211ENST00000498497 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 LRRIQ3A6PVS8 624 aaPredicted RBP13.41□□□□□ -0.26
PBX1-211ENST00000498497 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
PBX1-211ENST00000498497 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 FMNL3Q8IVF7 1028 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 ATRIPQ8WXE1 791 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 KAT14Q9H8E8 782 aa13.41□□□□□ -0.26
PBX1-211ENST00000498497 LIMCH1Q9UPQ0 1083 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms