RNA–Protein interactions for RNA: ENST00000498300.5

CCSER2-209, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-209ENST00000498300 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
CCSER2-209ENST00000498300 COL11A2P13942 1736 aaPredicted RBP10.07□□□□□ -0.8
CCSER2-209ENST00000498300 FER1L6Q2WGJ9 1857 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 A0A087WZG4 1122 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
CCSER2-209ENST00000498300 PDE6BP35913 854 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 TYW1BQ6NUM6 668 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 TTC5Q8N0Z6 440 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 IL17REQ8NFR9 667 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 LRCH3Q96II8 777 aa10.07□□□□□ -0.8
CCSER2-209ENST00000498300 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
CCSER2-209ENST00000498300 SCN7AQ01118 1682 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 DICER1Q9UPY3 1922 aaKnown RBP10.06□□□□□ -0.8
CCSER2-209ENST00000498300 DDNO94850 711 aaPredicted RBP10.06□□□□□ -0.8
CCSER2-209ENST00000498300 PDE4AP27815 886 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 ZNF790Q6PG37 636 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
CCSER2-209ENST00000498300 KIF7Q2M1P5 1343 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 LTBP3Q9NS15 1303 aa10.06□□□□□ -0.8
CCSER2-209ENST00000498300 SLX4Q8IY92 1834 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 PER1O15534 1290 aaPredicted RBP10.05□□□□□ -0.8
CCSER2-209ENST00000498300 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 A1BGP04217 495 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
CCSER2-209ENST00000498300 TEFQ10587 303 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 TEX13AQ9BXU3 409 aaPredicted RBP10.05□□□□□ -0.8
CCSER2-209ENST00000498300 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
CCSER2-209ENST00000498300 MKRN1Q9UHC7 482 aaKnown RBP10.05□□□□□ -0.8
CCSER2-209ENST00000498300 PCNTO95613 3336 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 SIPA1L3O60292 1781 aaPredicted RBP10.04□□□□□ -0.8
CCSER2-209ENST00000498300 GNAT3A8MTJ3 354 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 SRGNP10124 158 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
CCSER2-209ENST00000498300 STYK1Q6J9G0 422 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 PRPF40BQ6NWY9 871 aaKnown RBP10.04□□□□□ -0.8
CCSER2-209ENST00000498300 CNBD1Q8NA66 436 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 CNKSR1Q969H4 720 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
CCSER2-209ENST00000498300 COL3A1P02461 1466 aaPredicted RBP10.04□□□□□ -0.8
CCSER2-209ENST00000498300 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
CCSER2-209ENST00000498300 KCNQ3O43525 872 aa10.03□□□□□ -0.8
CCSER2-209ENST00000498300 CACNA1SQ13698 1873 aa10.03□□□□□ -0.8
CCSER2-209ENST00000498300 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
CCSER2-209ENST00000498300 CEMIPQ8WUJ3 1361 aa10.02□□□□□ -0.8
CCSER2-209ENST00000498300 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
CCSER2-209ENST00000498300 NPHP1O15259 732 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
CCSER2-209ENST00000498300 ST5P78524 1137 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
CCSER2-209ENST00000498300 GAS2L2Q8NHY3 880 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 C7orf43Q8WVR3 580 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 MASTLQ96GX5 879 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 PASKQ96RG2 1323 aa10.02□□□□□ -0.81
CCSER2-209ENST00000498300 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 BCORQ6W2J9 1755 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 PRAMEF22A3QJZ6 481 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 FOXN1O15353 648 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 SOGA3Q5TF21 947 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 PHACTR3Q96KR7 559 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 TAF1DQ9H5J8 278 aaPredicted RBP10.01□□□□□ -0.81
CCSER2-209ENST00000498300 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
CCSER2-209ENST00000498300 IQCA1LA6NCM1 817 aa10□□□□□ -0.81
CCSER2-209ENST00000498300 BTBD11A6QL63 1104 aa10□□□□□ -0.81
CCSER2-209ENST00000498300 CNGB1Q14028 1251 aaPredicted RBP10□□□□□ -0.81
CCSER2-209ENST00000498300 OLFM4Q6UX06 510 aa10□□□□□ -0.81
CCSER2-209ENST00000498300 NPM2Q86SE8 214 aaKnown RBP10□□□□□ -0.81
CCSER2-209ENST00000498300 LDHDQ86WU2 507 aa10□□□□□ -0.81
CCSER2-209ENST00000498300 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
CCSER2-209ENST00000498300 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
CCSER2-209ENST00000498300 ZNF541Q9H0D2 1346 aa10□□□□□ -0.81
CCSER2-209ENST00000498300 SCN4AP35499 1836 aa9.99□□□□□ -0.81
CCSER2-209ENST00000498300 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
CCSER2-209ENST00000498300 VEGFBP49765 207 aa9.99□□□□□ -0.81
CCSER2-209ENST00000498300 PPP4CP60510 307 aa9.99□□□□□ -0.81
CCSER2-209ENST00000498300 CCDC93Q567U6 631 aa9.99□□□□□ -0.81
CCSER2-209ENST00000498300 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
CCSER2-209ENST00000498300 ZNF277Q9NRM2 450 aaPredicted RBP9.99□□□□□ -0.81
CCSER2-209ENST00000498300 TMEM88BA6NKF7 163 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 NBPF26B4DH59 902 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 NPR1P16066 1061 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 PRKAR2BP31323 418 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCSER2-209ENST00000498300 EAPPQ56P03 285 aaPredicted RBP9.98□□□□□ -0.81
CCSER2-209ENST00000498300 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
CCSER2-209ENST00000498300 NBPF15Q8N660 670 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 DDX27Q96GQ7 796 aaKnown RBP9.98□□□□□ -0.81
CCSER2-209ENST00000498300 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 PRDM10Q9NQV6 1147 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 NPC1L1Q9UHC9 1359 aa9.98□□□□□ -0.81
CCSER2-209ENST00000498300 ADAMTSL1Q8N6G6 1762 aa9.97□□□□□ -0.81
CCSER2-209ENST00000498300 SNRPA1P09661 255 aaKnown RBP9.97□□□□□ -0.81
CCSER2-209ENST00000498300 EPHX2P34913 555 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms