RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 XAGE3Q8WTP9 111 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 SIRT1Q96EB6 747 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 PPP1R9BQ96SB3 815 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 GANQ9H2C0 597 aa1.84□□□□□ -2.11
XRN1-214ENST00000498077 BIN2Q9UBW5 565 aaPredicted RBP1.84□□□□□ -2.11
XRN1-214ENST00000498077 SSC5DA1L4H1 1573 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 TMEM265A0A087WTH1 108 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 PRRT4C9JH25 899 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 PROM1O43490 865 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 INHAP05111 366 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 RAB7AP51149 207 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 ATP8B2P98198 1209 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 PODNQ7Z5L7 613 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 ALYREFQ86V81 257 aaKnown RBP1.84□□□□□ -2.12
XRN1-214ENST00000498077 OLIG1Q8TAK6 271 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 GMCL1Q96IK5 515 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 PCMTD1Q96MG8 357 aaPredicted RBP1.84□□□□□ -2.12
XRN1-214ENST00000498077 TMEM134Q9H6X4 195 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 SEPT9Q9UHD8 586 aaPredicted RBP1.84□□□□□ -2.12
XRN1-214ENST00000498077 USP21Q9UK80 565 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 LIMCH1Q9UPQ0 1083 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 USP6P35125 1406 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 CNTNAP1P78357 1384 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 KDM2BQ8NHM5 1336 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 ASXL1Q8IXJ9 1541 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 COL24A1Q17RW2 1714 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 FERP16591 822 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 KCNF1Q9H3M0 494 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 GMEB2Q9UKD1 530 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 CHMP3Q9Y3E7 222 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 ADGRG1Q9Y653 693 aa1.84□□□□□ -2.12
XRN1-214ENST00000498077 CAMSAP2Q08AD1 1489 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PLEKHH2Q8IVE3 1493 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 POTEB3A0JP26 581 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 MAN1A2O60476 641 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 CAMTA2O94983 1202 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 VARSP26640 1264 aaKnown RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 PTK2Q05397 1052 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 MAP2K5Q13163 448 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 POTEBQ6S5H4 581 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 USP7Q93009 1102 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 MTFR1LQ9H019 292 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 VTI1BQ9UEU0 232 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 COL22A1Q8NFW1 1626 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 LAMB4A4D0S4 1761 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 IGHA1P01876 353 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 ALDH2P05091 517 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 S100A2P29034 98 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 GCGRP47871 477 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PROX2Q3B8N5 592 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 MICALL1Q8N3F8 863 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PDCL2Q8N4E4 241 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 STAG1Q8WVM7 1258 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 ERCC4Q92889 916 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 RIPOR3Q96MK2 946 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 USP26Q9BXU7 913 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 SLC12A7Q9Y666 1083 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 TRIOBPQ9H2D6 2365 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 TDRD9Q8NDG6 1382 aaKnown RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 BRWD3Q6RI45 1802 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 SSH2Q76I76 1423 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 A0A0U1RQG5 324 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 ALDH5A1P51649 535 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 BPIFB4P59827 614 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PTP4A2Q12974 167 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 NFIXQ14938 502 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 SSH3Q8TE77 659 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 MCOLN1Q9GZU1 580 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 ZBTB3Q9H5J0 574 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PHF24Q9UPV7 400 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 SPDYE3A6NKU9 549 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 H0YHG0 523 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PEX1O43933 1283 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 KDM4AO75164 1064 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 RAB32Q13637 225 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 NKX1-1Q15270 411 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 HS1BP3Q53T59 392 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 OGFOD2Q6N063 350 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 GABPB2Q8TAK5 448 aaPredicted RBP1.83□□□□□ -2.12
XRN1-214ENST00000498077 WHAMMQ8TF30 809 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 ZNF622Q969S3 477 aaKnown RBP eCLIP1.83□□□□□ -2.128e-7■■□□□ 11.8
XRN1-214ENST00000498077 VTI1AQ96AJ9 217 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 DDX11Q96FC9 970 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 PRRX2Q99811 253 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 LRRC4CQ9HCJ2 640 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 EMILIN3Q9NT22 766 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 SLC27A5Q9Y2P5 690 aa1.83□□□□□ -2.12
XRN1-214ENST00000498077 C6orf229H3BNL8 230 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 SMTNP53814 917 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 RABL6Q3YEC7 729 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 LAX1Q8IWV1 398 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 LRRC59Q96AG4 307 aaKnown RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 CDCA7Q9BWT1 371 aaPredicted RBP1.82□□□□□ -2.12
XRN1-214ENST00000498077 KIAA1586Q9HCI6 787 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 BCCIPQ9P287 314 aaKnown RBP eCLIP1.82□□□□□ -2.12
XRN1-214ENST00000498077 INMT-MINDY4F8WBC2 141 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 SNAP23O00161 211 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 FECHP22830 423 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 NOS2P35228 1153 aa1.82□□□□□ -2.12
XRN1-214ENST00000498077 GJA5P36382 358 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms