RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 PDZRN3Q9UPQ7 1066 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
PTPN3-206ENST00000497739 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
PTPN3-206ENST00000497739 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
PTPN3-206ENST00000497739 SRGNP10124 158 aa12.42□□□□□ -0.42
PTPN3-206ENST00000497739 VEGFBP49765 207 aa12.42□□□□□ -0.42
PTPN3-206ENST00000497739 DOK7Q18PE1 504 aa12.42□□□□□ -0.42
PTPN3-206ENST00000497739 ZNF622Q969S3 477 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPN3-206ENST00000497739 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
PTPN3-206ENST00000497739 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 A0A087WZG4 1122 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 STYK1Q6J9G0 422 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
PTPN3-206ENST00000497739 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 IL6STP40189 918 aaPredicted RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 CNBD1Q8NA66 436 aa12.4□□□□□ -0.42
PTPN3-206ENST00000497739 TSPYL4Q9UJ04 414 aa12.4□□□□□ -0.42
PTPN3-206ENST00000497739 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
PTPN3-206ENST00000497739 RRP7AQ9Y3A4 280 aaKnown RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.42
PTPN3-206ENST00000497739 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
PTPN3-206ENST00000497739 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
PTPN3-206ENST00000497739 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
PTPN3-206ENST00000497739 IQCA1LA6NCM1 817 aa12.39□□□□□ -0.43
PTPN3-206ENST00000497739 NPHP1O15259 732 aa12.39□□□□□ -0.43
PTPN3-206ENST00000497739 CNKSR1Q969H4 720 aa12.39□□□□□ -0.43
PTPN3-206ENST00000497739 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
PTPN3-206ENST00000497739 SCN4AP35499 1836 aa12.39□□□□□ -0.43
PTPN3-206ENST00000497739 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
PTPN3-206ENST00000497739 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
PTPN3-206ENST00000497739 LCE2DQ5TA82 110 aaPredicted RBP12.38□□□□□ -0.43
PTPN3-206ENST00000497739 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
PTPN3-206ENST00000497739 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
PTPN3-206ENST00000497739 THUMPD2Q9BTF0 503 aaKnown RBP12.38□□□□□ -0.43
PTPN3-206ENST00000497739 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
PTPN3-206ENST00000497739 A1BGP04217 495 aa12.37□□□□□ -0.43
PTPN3-206ENST00000497739 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
PTPN3-206ENST00000497739 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
PTPN3-206ENST00000497739 COL4A5P29400 1685 aa12.37□□□□□ -0.43
PTPN3-206ENST00000497739 DPYSL4O14531 572 aa12.36□□□□□ -0.43
PTPN3-206ENST00000497739 LBX1P52954 281 aa12.36□□□□□ -0.43
PTPN3-206ENST00000497739 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPN3-206ENST00000497739 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
PTPN3-206ENST00000497739 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
PTPN3-206ENST00000497739 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
PTPN3-206ENST00000497739 LTBP1Q14766 1721 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 KCNQ3O43525 872 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 ST18O60284 1047 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 ST5P78524 1137 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 CCDC93Q567U6 631 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 ARSIQ5FYB1 569 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
PTPN3-206ENST00000497739 BABAM1Q9NWV8 329 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
PTPN3-206ENST00000497739 FZD9O00144 591 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 APAF1O14727 1248 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 NPR1P16066 1061 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 EPHX2P34913 555 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTPN3-206ENST00000497739 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
PTPN3-206ENST00000497739 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 HACL1Q9UJ83 578 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
PTPN3-206ENST00000497739 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
PTPN3-206ENST00000497739 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
PTPN3-206ENST00000497739 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
PTPN3-206ENST00000497739 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
PTPN3-206ENST00000497739 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
PTPN3-206ENST00000497739 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
PTPN3-206ENST00000497739 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
PTPN3-206ENST00000497739 FAM9BQ8IZU0 186 aa12.33□□□□□ -0.44
PTPN3-206ENST00000497739 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
PTPN3-206ENST00000497739 TNRC18O15417 2968 aaPredicted RBP12.32□□□□□ -0.44
PTPN3-206ENST00000497739 TBC1D12O60347 775 aa12.32□□□□□ -0.44
PTPN3-206ENST00000497739 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
PTPN3-206ENST00000497739 KIF6Q6ZMV9 814 aa12.32□□□□□ -0.44
PTPN3-206ENST00000497739 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
PTPN3-206ENST00000497739 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
PTPN3-206ENST00000497739 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
PTPN3-206ENST00000497739 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
PTPN3-206ENST00000497739 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
PTPN3-206ENST00000497739 GNAI1P63096 354 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
PTPN3-206ENST00000497739 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
PTPN3-206ENST00000497739 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
PTPN3-206ENST00000497739 GPC2Q8N158 579 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms