RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
TNRC18-210ENST00000497663 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
TNRC18-210ENST00000497663 UBN2Q6ZU65 1347 aa20.01■□□□□ 0.79
TNRC18-210ENST00000497663 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 ANXA1P04083 346 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 GPTP24298 496 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
TNRC18-210ENST00000497663 DOK7Q18PE1 504 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 PROSER3Q2NL68 480 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 ZBTB3Q9H5J0 574 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 LTBP3Q9NS15 1303 aa20■□□□□ 0.79
TNRC18-210ENST00000497663 NPR1P16066 1061 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 PDIA6Q15084 440 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 IFFO2Q5TF58 517 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 TPTE2Q6XPS3 522 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 CCDC146Q8IYE0 955 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 SMC1BQ8NDV3 1235 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 KCNV2Q8TDN2 545 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 ZNF277Q9NRM2 450 aaPredicted RBP19.99■□□□□ 0.79
TNRC18-210ENST00000497663 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
TNRC18-210ENST00000497663 RIPK4P57078 832 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 KRT24Q2M2I5 525 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 SUSD4Q5VX71 490 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
TNRC18-210ENST00000497663 KLRG1Q96E93 195 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
TNRC18-210ENST00000497663 ZNF541Q9H0D2 1346 aa19.97■□□□□ 0.79
TNRC18-210ENST00000497663 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
TNRC18-210ENST00000497663 SLC34A2O95436 690 aa19.96■□□□□ 0.79
TNRC18-210ENST00000497663 TSPYL4Q9UJ04 414 aa19.96■□□□□ 0.79
TNRC18-210ENST00000497663 DICER1Q9UPY3 1922 aaKnown RBP19.96■□□□□ 0.79
TNRC18-210ENST00000497663 ERVV-1B6SEH8 477 aa19.95■□□□□ 0.78
TNRC18-210ENST00000497663 RIMBP2O15034 1052 aa19.95■□□□□ 0.78
TNRC18-210ENST00000497663 NEFMP07197 916 aa19.95■□□□□ 0.78
TNRC18-210ENST00000497663 EIF2S2P20042 333 aaKnown RBP19.95■□□□□ 0.78
TNRC18-210ENST00000497663 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
TNRC18-210ENST00000497663 NECTIN2Q92692 538 aa19.95■□□□□ 0.78
TNRC18-210ENST00000497663 COL4A5P29400 1685 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 CRY2Q49AN0 593 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 ZNF34Q8IZ26 560 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 ZNF428Q96B54 188 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 NUP98P52948 1817 aa19.94■□□□□ 0.78
TNRC18-210ENST00000497663 FKBP4Q02790 459 aaKnown RBP eCLIP19.93■□□□□ 0.78
TNRC18-210ENST00000497663 RALBP1Q15311 655 aa19.93■□□□□ 0.78
TNRC18-210ENST00000497663 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
TNRC18-210ENST00000497663 JMYQ8N9B5 988 aa19.93■□□□□ 0.78
TNRC18-210ENST00000497663 EMILIN3Q9NT22 766 aa19.93■□□□□ 0.78
TNRC18-210ENST00000497663 NTSR2O95665 410 aa19.92■□□□□ 0.78
TNRC18-210ENST00000497663 HOXB3P14651 431 aaPredicted RBP19.92■□□□□ 0.78
TNRC18-210ENST00000497663 GTF2E1P29083 439 aaPredicted RBP19.92■□□□□ 0.78
TNRC18-210ENST00000497663 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
TNRC18-210ENST00000497663 TCERG1O14776 1098 aaKnown RBP19.91■□□□□ 0.78
TNRC18-210ENST00000497663 ZNF710Q8N1W2 664 aa19.91■□□□□ 0.78
TNRC18-210ENST00000497663 SYNE4Q8N205 404 aa19.91■□□□□ 0.78
TNRC18-210ENST00000497663 SOGA3Q5TF21 947 aa19.9■□□□□ 0.78
TNRC18-210ENST00000497663 TBC1D12O60347 775 aa19.89■□□□□ 0.77
TNRC18-210ENST00000497663 GIGYF2Q6Y7W6 1299 aaKnown RBP19.89■□□□□ 0.77
TNRC18-210ENST00000497663 OXER1Q8TDS5 423 aa19.89■□□□□ 0.77
TNRC18-210ENST00000497663 PTCD2Q8WV60 388 aaKnown RBP19.89■□□□□ 0.77
TNRC18-210ENST00000497663 MYBBP1AQ9BQG0 1328 aaKnown RBP19.88■□□□□ 0.77
TNRC18-210ENST00000497663 PNNQ9H307 717 aaKnown RBP19.88■□□□□ 0.77
TNRC18-210ENST00000497663 TAF1DQ9H5J8 278 aaPredicted RBP19.88■□□□□ 0.77
TNRC18-210ENST00000497663 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
TNRC18-210ENST00000497663 HOXA10P31260 410 aaPredicted RBP19.87■□□□□ 0.77
TNRC18-210ENST00000497663 IARSP41252 1262 aaKnown RBP19.87■□□□□ 0.77
TNRC18-210ENST00000497663 COL13A1Q5TAT6 717 aaPredicted RBP19.87■□□□□ 0.77
TNRC18-210ENST00000497663 NYXQ9GZU5 481 aa19.87■□□□□ 0.77
TNRC18-210ENST00000497663 ARIH1Q9Y4X5 557 aaPredicted RBP19.87■□□□□ 0.77
TNRC18-210ENST00000497663 ERBB4Q15303 1308 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 CHL1O00533 1208 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 ALDH1B1P30837 517 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 MAP3K9P80192 1104 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 AIMP1Q12904 312 aaKnown RBP19.86■□□□□ 0.77
TNRC18-210ENST00000497663 COPS6Q7L5N1 327 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 RTKN2Q8IZC4 609 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 XAGE3Q8WTP9 111 aa19.86■□□□□ 0.77
TNRC18-210ENST00000497663 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
TNRC18-210ENST00000497663 FZD9O00144 591 aa19.85■□□□□ 0.77
TNRC18-210ENST00000497663 DPYSL4O14531 572 aa19.85■□□□□ 0.77
TNRC18-210ENST00000497663 ZSWIM6Q9HCJ5 1215 aa19.85■□□□□ 0.77
TNRC18-210ENST00000497663 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
TNRC18-210ENST00000497663 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
TNRC18-210ENST00000497663 RIC1Q4ADV7 1423 aa19.84■□□□□ 0.77
TNRC18-210ENST00000497663 HCLS1P14317 486 aaPredicted RBP19.83■□□□□ 0.77
TNRC18-210ENST00000497663 RPGRQ92834 1020 aaKnown RBP19.83■□□□□ 0.77
TNRC18-210ENST00000497663 PSMD1Q99460 953 aa19.83■□□□□ 0.77
TNRC18-210ENST00000497663 PCDHGA4Q9Y5G9 962 aa19.83■□□□□ 0.77
TNRC18-210ENST00000497663 PASKQ96RG2 1323 aa19.82■□□□□ 0.76
TNRC18-210ENST00000497663 PPEF1O14829 653 aaPredicted RBP19.82■□□□□ 0.76
TNRC18-210ENST00000497663 EAPPQ56P03 285 aaPredicted RBP19.82■□□□□ 0.76
TNRC18-210ENST00000497663 NLRP10Q86W26 655 aa19.82■□□□□ 0.76
TNRC18-210ENST00000497663 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
TNRC18-210ENST00000497663 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
TNRC18-210ENST00000497663 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
TNRC18-210ENST00000497663 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
TNRC18-210ENST00000497663 MKRN1Q9UHC7 482 aaKnown RBP19.82■□□□□ 0.76
TNRC18-210ENST00000497663 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms