RNA–Protein interactions for RNA: ENST00000497553.2

FOXP1-216, Transcript of forkhead box P1, humanhuman

TSL 4

Gene FOXP1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-216ENST00000497553 GRM8O00222 908 aa13.58□□□□□ -0.24
FOXP1-216ENST00000497553 KCNA3P22001 575 aa13.58□□□□□ -0.24
FOXP1-216ENST00000497553 CCT4P50991 539 aaKnown RBP13.58□□□□□ -0.24
FOXP1-216ENST00000497553 DALRD3Q5D0E6 543 aaKnown RBP13.58□□□□□ -0.24
FOXP1-216ENST00000497553 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
FOXP1-216ENST00000497553 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
FOXP1-216ENST00000497553 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
FOXP1-216ENST00000497553 TAF1P21675 1872 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 UTRNP46939 3433 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 YBX3P16989 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
FOXP1-216ENST00000497553 TTLL6Q8N841 843 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 TNNQ9UQP3 1299 aa13.57□□□□□ -0.24
FOXP1-216ENST00000497553 H7C1W4 665 aa13.56□□□□□ -0.24
FOXP1-216ENST00000497553 PDE8AO60658 829 aa13.56□□□□□ -0.24
FOXP1-216ENST00000497553 CTSWP56202 376 aa13.56□□□□□ -0.24
FOXP1-216ENST00000497553 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
FOXP1-216ENST00000497553 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
FOXP1-216ENST00000497553 LRRC37AA6NMS7 1700 aa13.56□□□□□ -0.24
FOXP1-216ENST00000497553 CASP7P55210 303 aa13.55□□□□□ -0.24
FOXP1-216ENST00000497553 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
FOXP1-216ENST00000497553 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
FOXP1-216ENST00000497553 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
FOXP1-216ENST00000497553 CHD4Q14839 1912 aa13.54□□□□□ -0.24
FOXP1-216ENST00000497553 COL4A1P02462 1669 aa13.54□□□□□ -0.24
FOXP1-216ENST00000497553 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
FOXP1-216ENST00000497553 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
FOXP1-216ENST00000497553 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
FOXP1-216ENST00000497553 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
FOXP1-216ENST00000497553 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
FOXP1-216ENST00000497553 FER1L6Q2WGJ9 1857 aa13.54□□□□□ -0.24
FOXP1-216ENST00000497553 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
FOXP1-216ENST00000497553 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
FOXP1-216ENST00000497553 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
FOXP1-216ENST00000497553 GRAPQ13588 217 aa13.53□□□□□ -0.24
FOXP1-216ENST00000497553 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
FOXP1-216ENST00000497553 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
FOXP1-216ENST00000497553 GRAPLQ8TC17 118 aaPredicted RBP13.53□□□□□ -0.24
FOXP1-216ENST00000497553 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
FOXP1-216ENST00000497553 UTYO14607 1347 aa13.53□□□□□ -0.24
FOXP1-216ENST00000497553 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
FOXP1-216ENST00000497553 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 ITPRIPQ8IWB1 547 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
FOXP1-216ENST00000497553 TMEM57Q8N5G2 664 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
FOXP1-216ENST00000497553 C21orf2O43822 256 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 PLIN1O60240 522 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 UBTFL1P0CB47 393 aaPredicted RBP13.51□□□□□ -0.25
FOXP1-216ENST00000497553 MS4A1P11836 297 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 RLBP1P12271 317 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 SOGA3Q5TF21 947 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 MEIS3Q99687 375 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 USP44Q9H0E7 712 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 GREM2Q9H772 168 aa13.51□□□□□ -0.25
FOXP1-216ENST00000497553 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
FOXP1-216ENST00000497553 TIAM2Q8IVF5 1701 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 TTLL11Q8NHH1 800 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
FOXP1-216ENST00000497553 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
FOXP1-216ENST00000497553 SEC31BQ9NQW1 1179 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
FOXP1-216ENST00000497553 SBF1O95248 1867 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 CCDC88AQ3V6T2 1871 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 GNAI3P08754 354 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 FOXO4P98177 505 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
FOXP1-216ENST00000497553 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
FOXP1-216ENST00000497553 BICC1Q9H694 974 aaKnown RBP13.49□□□□□ -0.25
FOXP1-216ENST00000497553 LTBP1Q14766 1721 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 ITGA6P23229 1130 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
FOXP1-216ENST00000497553 RASSF7Q02833 373 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 SLC51AQ86UW1 340 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 ANKRD18AQ8IVF6 992 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
FOXP1-216ENST00000497553 LRRFIP2Q9Y608 721 aaKnown RBP13.48□□□□□ -0.25
FOXP1-216ENST00000497553 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
FOXP1-216ENST00000497553 DUOX1Q9NRD9 1551 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 BBOX1O75936 387 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 CSF1RP07333 972 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
FOXP1-216ENST00000497553 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
FOXP1-216ENST00000497553 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
FOXP1-216ENST00000497553 TAOK3Q9H2K8 898 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms