RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 HCLS1P14317 486 aaPredicted RBP24.65■■□□□ 1.54
SCAMP3-209ENST00000497470 CEP85Q6P2H3 762 aa24.65■■□□□ 1.54
SCAMP3-209ENST00000497470 SSH3Q8TE77 659 aa24.65■■□□□ 1.54
SCAMP3-209ENST00000497470 POLA2Q14181 598 aa24.64■■□□□ 1.54
SCAMP3-209ENST00000497470 EPHA10Q5JZY3 1008 aa24.64■■□□□ 1.54
SCAMP3-209ENST00000497470 LMBR1LQ6UX01 489 aa24.64■■□□□ 1.54
SCAMP3-209ENST00000497470 CRAMP1Q96RY5 1269 aa24.63■■□□□ 1.53
SCAMP3-209ENST00000497470 HDAC1Q13547 482 aaPredicted RBP24.62■■□□□ 1.53
SCAMP3-209ENST00000497470 RTL5Q5HYW3 569 aaPredicted RBP24.62■■□□□ 1.53
SCAMP3-209ENST00000497470 JARID2Q92833 1246 aaPredicted RBP24.62■■□□□ 1.53
SCAMP3-209ENST00000497470 SRGNP10124 158 aa24.61■■□□□ 1.53
SCAMP3-209ENST00000497470 NPR1P16066 1061 aa24.61■■□□□ 1.53
SCAMP3-209ENST00000497470 STYK1Q6J9G0 422 aa24.61■■□□□ 1.53
SCAMP3-209ENST00000497470 TMC4Q7Z404 712 aa24.61■■□□□ 1.53
SCAMP3-209ENST00000497470 ANKRD31Q8N7Z5 1873 aa24.61■■□□□ 1.53
SCAMP3-209ENST00000497470 IFIT5Q13325 482 aaKnown RBP24.6■■□□□ 1.53
SCAMP3-209ENST00000497470 CCDC57Q2TAC2 916 aa24.6■■□□□ 1.53
SCAMP3-209ENST00000497470 CDC5LQ99459 802 aaKnown RBP24.6■■□□□ 1.53
SCAMP3-209ENST00000497470 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
SCAMP3-209ENST00000497470 PCDHB15Q9Y5E8 787 aa24.6■■□□□ 1.53
SCAMP3-209ENST00000497470 ANKRD18BA2A2Z9 1011 aa24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 H0YIN7 160 aa24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 ALDH1B1P30837 517 aa24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 MASTLQ96GX5 879 aa24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
SCAMP3-209ENST00000497470 SRGAP3O43295 1099 aa24.58■■□□□ 1.53
SCAMP3-209ENST00000497470 RFX5P48382 616 aaPredicted RBP24.58■■□□□ 1.53
SCAMP3-209ENST00000497470 DDX46Q7L014 1031 aaKnown RBP24.58■■□□□ 1.53
SCAMP3-209ENST00000497470 SIRT2Q8IXJ6 389 aa24.58■■□□□ 1.53
SCAMP3-209ENST00000497470 BBOX1O75936 387 aa24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 ITGA6P23229 1130 aa24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 HSP90AB4PQ58FF6 505 aa24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 RPGRQ92834 1020 aaKnown RBP24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 RWDD1Q9H446 243 aaPredicted RBP24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 GREM2Q9H772 168 aa24.57■■□□□ 1.52
SCAMP3-209ENST00000497470 TNRC6CQ9HCJ0 1690 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 PNMA6EA0A0J9YXQ4 647 aa24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 CNKSR1Q969H4 720 aa24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 C1orf115Q9H7X2 142 aa24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 LRP5O75197 1615 aa24.56■■□□□ 1.52
SCAMP3-209ENST00000497470 CIAO1O76071 339 aa24.55■■□□□ 1.52
SCAMP3-209ENST00000497470 PTPN12Q05209 780 aaKnown RBP24.55■■□□□ 1.52
SCAMP3-209ENST00000497470 GRAPQ13588 217 aa24.55■■□□□ 1.52
SCAMP3-209ENST00000497470 FAM161AQ3B820 660 aa24.55■■□□□ 1.52
SCAMP3-209ENST00000497470 GRAPLQ8TC17 118 aaPredicted RBP24.55■■□□□ 1.52
SCAMP3-209ENST00000497470 RPS8P62241 208 aaKnown RBP24.54■■□□□ 1.52
SCAMP3-209ENST00000497470 C2CD5Q86YS7 1000 aa24.54■■□□□ 1.52
SCAMP3-209ENST00000497470 BSDC1Q9NW68 430 aaPredicted RBP24.54■■□□□ 1.52
SCAMP3-209ENST00000497470 PPP4R2Q9NY27 417 aa24.54■■□□□ 1.52
SCAMP3-209ENST00000497470 GRIPAP1Q4V328 841 aa24.53■■□□□ 1.52
SCAMP3-209ENST00000497470 CCDC24Q8N4L8 307 aa24.53■■□□□ 1.52
SCAMP3-209ENST00000497470 DCTPP1Q9H773 170 aa24.53■■□□□ 1.52
SCAMP3-209ENST00000497470 DLEC1Q9Y238 1755 aa24.52■■□□□ 1.52
SCAMP3-209ENST00000497470 IGHMBP2P38935 993 aaKnown RBP24.52■■□□□ 1.52
SCAMP3-209ENST00000497470 ANKRD18AQ8IVF6 992 aa24.52■■□□□ 1.52
SCAMP3-209ENST00000497470 GCC1Q96CN9 775 aa24.52■■□□□ 1.52
SCAMP3-209ENST00000497470 RAB11FIP3O75154 756 aa24.51■■□□□ 1.51
SCAMP3-209ENST00000497470 CHMP3Q9Y3E7 222 aa24.51■■□□□ 1.51
SCAMP3-209ENST00000497470 KCNA3P22001 575 aa24.5■■□□□ 1.51
SCAMP3-209ENST00000497470 CC2D2BQ6DHV5 1058 aa24.5■■□□□ 1.51
SCAMP3-209ENST00000497470 ERC1Q8IUD2 1116 aa24.5■■□□□ 1.51
SCAMP3-209ENST00000497470 KIAA1551Q9HCM1 1747 aa24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 EYA2O00167 538 aa24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 IL15P40933 162 aaPredicted RBP24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 SMC5Q8IY18 1101 aa24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 MPHOSPH8Q99549 860 aa24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 SEC31BQ9NQW1 1179 aa24.49■■□□□ 1.51
SCAMP3-209ENST00000497470 TAF7LQ5H9L4 462 aa24.48■■□□□ 1.51
SCAMP3-209ENST00000497470 LDHAL6AQ6ZMR3 332 aa24.48■■□□□ 1.51
SCAMP3-209ENST00000497470 TTLL6Q8N841 843 aa24.48■■□□□ 1.51
SCAMP3-209ENST00000497470 PIM2Q9P1W9 311 aa24.48■■□□□ 1.51
SCAMP3-209ENST00000497470 RIPOR2Q9Y4F9 1068 aa24.48■■□□□ 1.51
SCAMP3-209ENST00000497470 COL11A2P13942 1736 aaPredicted RBP24.47■■□□□ 1.51
SCAMP3-209ENST00000497470 MROH5Q6ZUA9 1318 aa24.47■■□□□ 1.51
SCAMP3-209ENST00000497470 DPEP1P16444 411 aa24.47■■□□□ 1.51
SCAMP3-209ENST00000497470 SP8Q8IXZ3 490 aa24.47■■□□□ 1.51
SCAMP3-209ENST00000497470 CELF1Q92879 486 aaKnown RBP24.47■■□□□ 1.51
SCAMP3-209ENST00000497470 G3BP1Q13283 466 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCAMP3-209ENST00000497470 PPP1R1BQ9UD71 204 aaPredicted RBP24.46■■□□□ 1.51
SCAMP3-209ENST00000497470 ATP6V0A2Q9Y487 856 aa24.46■■□□□ 1.51
SCAMP3-209ENST00000497470 SURF6O75683 361 aaKnown RBP24.45■■□□□ 1.5
SCAMP3-209ENST00000497470 SOGA3Q5TF21 947 aa24.45■■□□□ 1.5
SCAMP3-209ENST00000497470 ANKRD2Q9GZV1 360 aa24.45■■□□□ 1.5
SCAMP3-209ENST00000497470 GPR108Q9NPR9 543 aa24.45■■□□□ 1.5
SCAMP3-209ENST00000497470 CHRNA5P30532 468 aa24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 ATG9AQ7Z3C6 839 aa24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 C7orf43Q8WVR3 580 aa24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 ZNF622Q969S3 477 aaKnown RBP eCLIP24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 KIF1BPQ96EK5 621 aa24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 CCDC85AQ96PX6 553 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 SYT17Q9BSW7 474 aa24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 FHDC1Q9C0D6 1143 aaPredicted RBP24.44■■□□□ 1.5
SCAMP3-209ENST00000497470 CENPQQ7L2Z9 268 aaPredicted RBP24.43■■□□□ 1.5
SCAMP3-209ENST00000497470 CCDC136Q96JN2 1154 aa24.43■■□□□ 1.5
SCAMP3-209ENST00000497470 CNNM1Q9NRU3 951 aa24.43■■□□□ 1.5
SCAMP3-209ENST00000497470 PODXL2Q9NZ53 605 aa24.43■■□□□ 1.5
SCAMP3-209ENST00000497470 A0A0G2JLW4 131 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms