RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 ERVV-1B6SEH8 477 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
TOM1-217ENST00000497448 TNIP1Q15025 636 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 SUSD4Q5VX71 490 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 C2orf69Q8N8R5 385 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 PHACTR3Q96KR7 559 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
TOM1-217ENST00000497448 HTTP42858 3142 aa14.01□□□□□ -0.17
TOM1-217ENST00000497448 TAF1P21675 1872 aa14□□□□□ -0.17
TOM1-217ENST00000497448 H7C1D1 291 aa14□□□□□ -0.17
TOM1-217ENST00000497448 EGFRP00533 1210 aa14□□□□□ -0.17
TOM1-217ENST00000497448 DPP8Q6V1X1 898 aaPredicted RBP14□□□□□ -0.17
TOM1-217ENST00000497448 MCM10Q7L590 875 aa14□□□□□ -0.17
TOM1-217ENST00000497448 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
TOM1-217ENST00000497448 NGEFQ8N5V2 710 aa14□□□□□ -0.17
TOM1-217ENST00000497448 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
TOM1-217ENST00000497448 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
TOM1-217ENST00000497448 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
TOM1-217ENST00000497448 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
TOM1-217ENST00000497448 RASAL3Q86YV0 1011 aa13.99□□□□□ -0.17
TOM1-217ENST00000497448 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
TOM1-217ENST00000497448 TBC1D10BQ4KMP7 808 aaPredicted RBP13.98□□□□□ -0.17
TOM1-217ENST00000497448 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
TOM1-217ENST00000497448 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
TOM1-217ENST00000497448 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
TOM1-217ENST00000497448 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
TOM1-217ENST00000497448 BRCA2P51587 3418 aa13.97□□□□□ -0.17
TOM1-217ENST00000497448 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
TOM1-217ENST00000497448 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
TOM1-217ENST00000497448 MPNDQ8N594 471 aa13.97□□□□□ -0.17
TOM1-217ENST00000497448 ZNF296Q8WUU4 475 aaPredicted RBP13.97□□□□□ -0.17
TOM1-217ENST00000497448 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
TOM1-217ENST00000497448 PSMD14O00487 310 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 DPF2Q92785 391 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 DCPSQ96C86 337 aaKnown RBP13.96□□□□□ -0.17
TOM1-217ENST00000497448 HDAC9Q9UKV0 1011 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 CENPFP49454 3210 aa13.96□□□□□ -0.17
TOM1-217ENST00000497448 SCN9AQ15858 1988 aa13.95□□□□□ -0.18
TOM1-217ENST00000497448 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
TOM1-217ENST00000497448 REM2Q8IYK8 340 aaPredicted RBP13.95□□□□□ -0.18
TOM1-217ENST00000497448 RTF1Q92541 710 aaKnown RBP13.95□□□□□ -0.18
TOM1-217ENST00000497448 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
TOM1-217ENST00000497448 DLG5Q8TDM6 1919 aa13.94□□□□□ -0.18
TOM1-217ENST00000497448 MYL6BP14649 208 aa13.94□□□□□ -0.18
TOM1-217ENST00000497448 FXR1P51114 621 aaKnown RBP eCLIP13.94□□□□□ -0.18
TOM1-217ENST00000497448 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
TOM1-217ENST00000497448 GIGYF2Q6Y7W6 1299 aaKnown RBP13.94□□□□□ -0.18
TOM1-217ENST00000497448 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
TOM1-217ENST00000497448 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
TOM1-217ENST00000497448 RRP7AQ9Y3A4 280 aaKnown RBP13.94□□□□□ -0.18
TOM1-217ENST00000497448 ASTN2O75129 1339 aaPredicted RBP13.93□□□□□ -0.18
TOM1-217ENST00000497448 BBOX1O75936 387 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 KIF4BQ2VIQ3 1234 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 RBM26Q5T8P6 1007 aaKnown RBP13.93□□□□□ -0.18
TOM1-217ENST00000497448 SULF1Q8IWU6 871 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
TOM1-217ENST00000497448 PSME4Q14997 1843 aa13.92□□□□□ -0.18
TOM1-217ENST00000497448 COL4A1P02462 1669 aa13.92□□□□□ -0.18
TOM1-217ENST00000497448 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
TOM1-217ENST00000497448 RPS12P25398 132 aaKnown RBP13.92□□□□□ -0.18
TOM1-217ENST00000497448 GRAPQ13588 217 aa13.92□□□□□ -0.18
TOM1-217ENST00000497448 SLC10A5Q5PT55 438 aa13.92□□□□□ -0.18
TOM1-217ENST00000497448 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
TOM1-217ENST00000497448 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
TOM1-217ENST00000497448 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
TOM1-217ENST00000497448 GPR25O00155 361 aa13.9□□□□□ -0.18
TOM1-217ENST00000497448 TAF7Q15545 349 aaPredicted RBP13.9□□□□□ -0.18
TOM1-217ENST00000497448 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
TOM1-217ENST00000497448 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 ECE2O60344 883 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 HCLS1P14317 486 aaPredicted RBP13.89□□□□□ -0.19
TOM1-217ENST00000497448 FKBP1BP68106 108 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 DDX46Q7L014 1031 aaKnown RBP13.89□□□□□ -0.19
TOM1-217ENST00000497448 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
TOM1-217ENST00000497448 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
TOM1-217ENST00000497448 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
TOM1-217ENST00000497448 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
TOM1-217ENST00000497448 MOB2Q70IA6 237 aa13.88□□□□□ -0.19
TOM1-217ENST00000497448 ZNF609O15014 1411 aa13.88□□□□□ -0.19
TOM1-217ENST00000497448 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
TOM1-217ENST00000497448 RIMBP2O15034 1052 aa13.87□□□□□ -0.19
TOM1-217ENST00000497448 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
TOM1-217ENST00000497448 TMC4Q7Z404 712 aa13.87□□□□□ -0.19
TOM1-217ENST00000497448 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
TOM1-217ENST00000497448 LAMB1P07942 1786 aa13.86□□□□□ -0.19
TOM1-217ENST00000497448 FKTNO75072 461 aa13.86□□□□□ -0.19
TOM1-217ENST00000497448 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
TOM1-217ENST00000497448 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
TOM1-217ENST00000497448 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
TOM1-217ENST00000497448 TM4SF4P48230 202 aa13.85□□□□□ -0.19
TOM1-217ENST00000497448 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms