RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 KIF15Q9NS87 1388 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 BICDL2A1A5D9 508 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 INF2Q27J81 1249 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 PPP4R3CPQ6ZMV5 832 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
VIT-208ENST00000497382 MUC3BQ9H195 1237 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 PTPN23Q9H3S7 1636 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 ASXL1Q8IXJ9 1541 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
VIT-208ENST00000497382 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 MUM1L1Q5H9M0 696 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 MYLK4Q86YV6 388 aaPredicted RBP11.3□□□□□ -0.6
VIT-208ENST00000497382 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
VIT-208ENST00000497382 REC8O95072 547 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 TSR1Q2NL82 804 aaKnown RBP11.29□□□□□ -0.6
VIT-208ENST00000497382 TBC1D25Q3MII6 688 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
VIT-208ENST00000497382 EFCAB13Q8IY85 973 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
VIT-208ENST00000497382 PTK7Q13308 1070 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 NAIF1Q69YI7 327 aaPredicted RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 DPH6Q7L8W6 267 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 CDC5LQ99459 802 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 TRPM2O94759 1503 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 RBM12BQ8IXT5 1001 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 UBXN4Q92575 508 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 QTRT2Q9H974 415 aaKnown RBP11.28□□□□□ -0.6
VIT-208ENST00000497382 MKS1Q9NXB0 559 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 RIMS2Q9UQ26 1411 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 LAMC1P11047 1609 aa11.28□□□□□ -0.6
VIT-208ENST00000497382 MYO1CO00159 1063 aa11.27□□□□□ -0.6
VIT-208ENST00000497382 TPPPO94811 219 aa11.27□□□□□ -0.6
VIT-208ENST00000497382 SOGA3Q5TF21 947 aa11.27□□□□□ -0.6
VIT-208ENST00000497382 DRAXINQ8NBI3 349 aaPredicted RBP11.27□□□□□ -0.6
VIT-208ENST00000497382 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.6
VIT-208ENST00000497382 PANK3Q9H999 370 aa11.27□□□□□ -0.6
VIT-208ENST00000497382 GCC2Q8IWJ2 1684 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 VCAM1P19320 739 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 FXNQ16595 210 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 SLC5A9Q2M3M2 681 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 CCDC92Q53HC0 331 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 CATIPQ7Z7H3 387 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 MYO1HQ8N1T3 1032 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 CCDC34Q96HJ3 373 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 YIPF2Q9BWQ6 316 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 MORC2Q9Y6X9 1032 aaPredicted RBP11.27□□□□□ -0.61
VIT-208ENST00000497382 SETBP1Q9Y6X0 1596 aa11.27□□□□□ -0.61
VIT-208ENST00000497382 TMEM131LA2VDJ0 1609 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 TCF3P15923 654 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 NGDNQ8NEJ9 315 aaKnown RBP11.26□□□□□ -0.61
VIT-208ENST00000497382 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 USP25Q9UHP3 1055 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
VIT-208ENST00000497382 RPS6KA3P51812 740 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 FILIP1LQ4L180 1135 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 C10orf67Q8IYJ2 551 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 ANKRD7Q92527 254 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 CRACR2AQ9BSW2 395 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 G3BP2Q9UN86 482 aaKnown RBP11.26□□□□□ -0.61
VIT-208ENST00000497382 PNPLA6Q8IY17 1366 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
VIT-208ENST00000497382 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 RRM1P23921 792 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
VIT-208ENST00000497382 CYP2C19P33261 490 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 TRIML1Q8N9V2 468 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 ADAMTS13Q76LX8 1427 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 SLC27A2O14975 620 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 ATICP31939 592 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 HHATQ5VTY9 493 aa11.25□□□□□ -0.61
VIT-208ENST00000497382 ONECUT3O60422 494 aaPredicted RBP11.24□□□□□ -0.61
VIT-208ENST00000497382 PPFIA3O75145 1194 aa11.24□□□□□ -0.61
VIT-208ENST00000497382 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms