RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 HMGB1P09429 215 aaKnown RBP5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 ARSDP51689 593 aa5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 LAMC2Q13753 1193 aa5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 FAM182BQ5T319 152 aa5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 SV2AQ7L0J3 742 aa5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 ZNF775Q96BV0 537 aaPredicted RBP5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 RTCBQ9Y3I0 505 aaKnown RBP5.7□□□□□ -1.5
EXOSC3-208ENST00000496910 CDC14CA4D256 554 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 KHNYNO15037 678 aaKnown RBP5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 EGFRP00533 1210 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 CD33P20138 364 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 MZF1P28698 734 aaPredicted RBP5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 CTBSQ01459 385 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 EDEM1Q92611 657 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 CEP63Q96MT8 703 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 FAM129BQ96TA1 746 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 SLC30A3Q99726 388 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 RBCK1Q9BYM8 510 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 GGNBP2Q9H3C7 697 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 POLIQ9UNA4 740 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 LRP5O75197 1615 aa5.69□□□□□ -1.5
EXOSC3-208ENST00000496910 SMARCA4P51532 1647 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 FGFR3P22607 806 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 PIP4K2BP78356 416 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 ALKBH2Q6NS38 261 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 RGL4Q8IZJ4 473 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 NUDT16Q96DE0 195 aaKnown RBP5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 MDFIQ99750 246 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 GSX2Q9BZM3 304 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 C11orf16Q9NQ32 467 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 GJA3Q9Y6H8 435 aa5.68□□□□□ -1.5
EXOSC3-208ENST00000496910 YEATS2Q9ULM3 1422 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 GPR182O15218 404 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 ZFATQ9P243 1243 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 KLF15Q9UIH9 416 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 DCTN4Q9UJW0 460 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 KCNH4Q9UQ05 1017 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 MYO15BQ96JP2 1530 aa5.67□□□□□ -1.5
EXOSC3-208ENST00000496910 KIF21BO75037 1637 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 PPRC1Q5VV67 1664 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 A6NHS1 94 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 DNM1Q05193 864 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 DSC3Q14574 896 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 TMC7Q7Z402 723 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 COL25A1Q9BXS0 654 aaPredicted RBP5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 NEUROD4Q9HD90 331 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 MARK1Q9P0L2 795 aa5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 BIN2Q9UBW5 565 aaPredicted RBP5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 EIF4G3O43432 1585 aaKnown RBP5.66□□□□□ -1.5
EXOSC3-208ENST00000496910 MAPKBP1O60336 1514 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 MARSP56192 900 aaKnown RBP5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 SPEM2Q0P670 501 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 TREML4Q6UXN2 200 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 PIK3R5Q8WYR1 880 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 IRF7Q92985 503 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 ASB16Q96NS5 453 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 CITED4Q96RK1 184 aa5.65□□□□□ -1.5
EXOSC3-208ENST00000496910 SYNJ1O43426 1573 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 TREHO43280 583 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 XYLBO75191 536 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 GMPRP36959 345 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 CCDC27Q2M243 656 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 COL13A1Q5TAT6 717 aaPredicted RBP5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 ZNF468Q5VIY5 522 aaPredicted RBP5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 NPAS4Q8IUM7 802 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 CMTR1Q8N1G2 835 aaKnown RBP5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 ALKBH8Q96BT7 664 aaKnown RBP5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 TRERF1Q96PN7 1200 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 CHRDQ9H2X0 955 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 MBIPQ9NS73 344 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 FAM13BQ9NYF5 915 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 TMEM63CQ9P1W3 806 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 USP35Q9P2H5 1018 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 BRPF3Q9ULD4 1205 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 PHF24Q9UPV7 400 aa5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.64□□□□□ -1.51
EXOSC3-208ENST00000496910 NDUFB5O43674 189 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 WFS1O76024 890 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 SLURP2P0DP57 97 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 HOXD8P13378 290 aaPredicted RBP5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 EPB42P16452 691 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 MAPK1P28482 360 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 FMR1Q06787 632 aaKnown RBP eCLIP5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 CCINQ13939 588 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 PDE12Q6L8Q7 609 aaKnown RBP5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 RAB44Q7Z6P3 723 aaPredicted RBP5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 SLC16A10Q8TF71 515 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 CHMP4AQ9BY43 222 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 HMGXB3Q12766 1538 aa5.63□□□□□ -1.51
EXOSC3-208ENST00000496910 SASH3O75995 380 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 MAP3K6O95382 1288 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 MX2P20592 715 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 TARSP26639 723 aaKnown RBP5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 USP5P45974 858 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 FOXR1Q6PIV2 292 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 C1orf229Q6ZS94 237 aaPredicted RBP5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 FCHSD1Q86WN1 690 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms