RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ADRA2BP18089 450 aa20.8■□□□□ 0.92
LMNA-216ENST00000496738 EZH2Q15910 746 aaKnown RBP20.8■□□□□ 0.92
LMNA-216ENST00000496738 ERFEQ4G0M1 354 aa20.8■□□□□ 0.92
LMNA-216ENST00000496738 ERC1Q8IUD2 1116 aa20.8■□□□□ 0.92
LMNA-216ENST00000496738 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
LMNA-216ENST00000496738 SSFA2P28290 1259 aa20.8■□□□□ 0.92
LMNA-216ENST00000496738 DDX60Q8IY21 1712 aaKnown RBP20.8■□□□□ 0.92
LMNA-216ENST00000496738 CCDC24Q8N4L8 307 aa20.79■□□□□ 0.92
LMNA-216ENST00000496738 MYH3P11055 1940 aa20.79■□□□□ 0.92
LMNA-216ENST00000496738 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
LMNA-216ENST00000496738 MX1P20591 662 aa20.79■□□□□ 0.92
LMNA-216ENST00000496738 PDE1AP54750 535 aa20.79■□□□□ 0.92
LMNA-216ENST00000496738 PUS3Q9BZE2 481 aaKnown RBP20.79■□□□□ 0.92
LMNA-216ENST00000496738 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
LMNA-216ENST00000496738 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
LMNA-216ENST00000496738 LRRC24Q50LG9 513 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 AKT1S1Q96B36 256 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 ITGA6P23229 1130 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 TFCP2Q12800 502 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 TTC22Q5TAA0 569 aa20.78■□□□□ 0.92
LMNA-216ENST00000496738 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
LMNA-216ENST00000496738 CLASRPQ8N2M8 674 aaKnown RBP20.78■□□□□ 0.92
LMNA-216ENST00000496738 RGL2O15211 777 aa20.77■□□□□ 0.92
LMNA-216ENST00000496738 AACSQ86V21 672 aa20.77■□□□□ 0.92
LMNA-216ENST00000496738 GYS1P13807 737 aa20.77■□□□□ 0.92
LMNA-216ENST00000496738 NFIXQ14938 502 aa20.77■□□□□ 0.92
LMNA-216ENST00000496738 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
LMNA-216ENST00000496738 TUBGCP6Q96RT7 1819 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 RGPD3A6NKT7 1758 aaPredicted RBP20.76■□□□□ 0.91
LMNA-216ENST00000496738 RGPD4Q7Z3J3 1758 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 ABCC12Q96J65 1359 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 ATG9AQ7Z3C6 839 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 C3orf67Q6ZVT6 689 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
LMNA-216ENST00000496738 LAMB2P55268 1798 aa20.75■□□□□ 0.91
LMNA-216ENST00000496738 ANKRD18BA2A2Z9 1011 aa20.75■□□□□ 0.91
LMNA-216ENST00000496738 DEFB132Q7Z7B7 95 aa20.75■□□□□ 0.91
LMNA-216ENST00000496738 EAF2Q96CJ1 260 aaPredicted RBP20.75■□□□□ 0.91
LMNA-216ENST00000496738 CCDC8Q9H0W5 538 aaPredicted RBP20.75■□□□□ 0.91
LMNA-216ENST00000496738 EYA2O00167 538 aa20.75■□□□□ 0.91
LMNA-216ENST00000496738 NPHP1O15259 732 aa20.75■□□□□ 0.91
LMNA-216ENST00000496738 IFIT2P09913 472 aaKnown RBP20.75■□□□□ 0.91
LMNA-216ENST00000496738 SF3B2Q13435 895 aaKnown RBP20.75■□□□□ 0.91
LMNA-216ENST00000496738 TLR7Q9NYK1 1049 aaKnown RBP20.75■□□□□ 0.91
LMNA-216ENST00000496738 COL23A1Q86Y22 540 aaPredicted RBP20.74■□□□□ 0.91
LMNA-216ENST00000496738 NYXQ9GZU5 481 aa20.74■□□□□ 0.91
LMNA-216ENST00000496738 SEC31BQ9NQW1 1179 aa20.74■□□□□ 0.91
LMNA-216ENST00000496738 OSBPL3Q9H4L5 887 aa20.73■□□□□ 0.91
LMNA-216ENST00000496738 CARMIL3Q8ND23 1372 aa20.73■□□□□ 0.91
LMNA-216ENST00000496738 SEC24BO95487 1268 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 HMGB2P26583 209 aaKnown RBP20.72■□□□□ 0.91
LMNA-216ENST00000496738 IL15P40933 162 aaPredicted RBP20.72■□□□□ 0.91
LMNA-216ENST00000496738 TPTE2Q6XPS3 522 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 PODXL2Q9NZ53 605 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 TNNI3KQ59H18 835 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 STAP2Q9UGK3 403 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 FPGT-TNNI3KV9GXZ4 949 aa20.72■□□□□ 0.91
LMNA-216ENST00000496738 CASZ1Q86V15 1759 aa20.71■□□□□ 0.91
LMNA-216ENST00000496738 SDSP20132 328 aa20.71■□□□□ 0.91
LMNA-216ENST00000496738 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
LMNA-216ENST00000496738 LDHAL6AQ6ZMR3 332 aa20.71■□□□□ 0.91
LMNA-216ENST00000496738 PNPLA7Q6ZV29 1317 aa20.71■□□□□ 0.91
LMNA-216ENST00000496738 CIAO1O76071 339 aa20.7■□□□□ 0.91
LMNA-216ENST00000496738 MAP4K4O95819 1239 aaPredicted RBP20.7■□□□□ 0.91
LMNA-216ENST00000496738 HSP90B1P14625 803 aaKnown RBP20.7■□□□□ 0.91
LMNA-216ENST00000496738 BAG6P46379 1132 aa20.7■□□□□ 0.91
LMNA-216ENST00000496738 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
LMNA-216ENST00000496738 COL4A1P02462 1669 aa20.7■□□□□ 0.9
LMNA-216ENST00000496738 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
LMNA-216ENST00000496738 CNBD1Q8NA66 436 aa20.69■□□□□ 0.9
LMNA-216ENST00000496738 SPEF2Q9C093 1822 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 TNRC6CQ9HCJ0 1690 aaKnown RBP20.68■□□□□ 0.9
LMNA-216ENST00000496738 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 DDR1Q08345 913 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 SLC10A5Q5PT55 438 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 NEUROD6Q96NK8 337 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 DBNLQ9UJU6 430 aaKnown RBP20.68■□□□□ 0.9
LMNA-216ENST00000496738 RIC1Q4ADV7 1423 aa20.68■□□□□ 0.9
LMNA-216ENST00000496738 MSL1Q68DK7 614 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 RILPL2Q969X0 211 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 ECHDC1Q9NTX5 307 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 CEP126Q9P2H0 1117 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 SERPINB2P05120 415 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 TM4SF1P30408 202 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 TIMM10P62072 90 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 SLC15A2Q16348 729 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 PRR5LQ6MZQ0 368 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 GPATCH3Q96I76 525 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 STK32BQ9NY57 414 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 AOX1Q06278 1338 aa20.67■□□□□ 0.9
LMNA-216ENST00000496738 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
LMNA-216ENST00000496738 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
LMNA-216ENST00000496738 LRP5O75197 1615 aa20.66■□□□□ 0.9
LMNA-216ENST00000496738 TAF1P21675 1872 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms