RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KIF6Q6ZMV9 814 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 FOXD4L4Q8WXT5 416 aaPredicted RBP15.66■□□□□ 0.1
GARNL3-220ENST00000496711 EDC3Q96F86 508 aaKnown RBP15.66■□□□□ 0.1
GARNL3-220ENST00000496711 HAUS7Q99871 368 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 ASAP1Q9ULH1 1129 aa15.66■□□□□ 0.1
GARNL3-220ENST00000496711 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
GARNL3-220ENST00000496711 SLC27A2O14975 620 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 PRPF40AO75400 957 aaKnown RBP15.65■□□□□ 0.1
GARNL3-220ENST00000496711 CPA1P15085 419 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 TCIRG1Q13488 830 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 DNAJC2Q99543 621 aaKnown RBP15.65■□□□□ 0.1
GARNL3-220ENST00000496711 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 PALLDQ8WX93 1383 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 CIAO1O76071 339 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 STARD3NLO95772 234 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 PSMA5P28066 241 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
GARNL3-220ENST00000496711 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
GARNL3-220ENST00000496711 PANK2Q9BZ23 570 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 HMG20BQ9P0W2 317 aa15.65■□□□□ 0.1
GARNL3-220ENST00000496711 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
GARNL3-220ENST00000496711 LAMA4Q16363 1823 aa15.64■□□□□ 0.09
GARNL3-220ENST00000496711 EYA2O00167 538 aa15.64■□□□□ 0.09
GARNL3-220ENST00000496711 GAS2L3Q86XJ1 694 aa15.64■□□□□ 0.09
GARNL3-220ENST00000496711 SH2B1Q9NRF2 756 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-220ENST00000496711 PHLPP1O60346 1717 aa15.64■□□□□ 0.09
GARNL3-220ENST00000496711 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
GARNL3-220ENST00000496711 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
GARNL3-220ENST00000496711 CAVIN1Q6NZI2 390 aaKnown RBP15.63■□□□□ 0.09
GARNL3-220ENST00000496711 MYH7P12883 1935 aa15.63■□□□□ 0.09
GARNL3-220ENST00000496711 LARGE1O95461 756 aa15.63■□□□□ 0.09
GARNL3-220ENST00000496711 CHAMP1Q96JM3 812 aa15.63■□□□□ 0.09
GARNL3-220ENST00000496711 SMC3Q9UQE7 1217 aa15.63■□□□□ 0.09
GARNL3-220ENST00000496711 TAF5LO75529 589 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 MBD3O95983 291 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
GARNL3-220ENST00000496711 ZNF445P59923 1031 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 KBTBD3Q8NAB2 608 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 GPT2Q8TD30 523 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 NEUROD6Q96NK8 337 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 LARP6Q9BRS8 491 aaKnown RBP15.62■□□□□ 0.09
GARNL3-220ENST00000496711 NDUFB9Q9Y6M9 179 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 MAP3K15Q6ZN16 1313 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 SH3TC1Q8TE82 1336 aa15.62■□□□□ 0.09
GARNL3-220ENST00000496711 ZSCAN23Q3MJ62 389 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 LRRC24Q50LG9 513 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 USPL1Q5W0Q7 1092 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 BLOC1S2Q6QNY1 142 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 DDX46Q7L014 1031 aaKnown RBP15.61■□□□□ 0.09
GARNL3-220ENST00000496711 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
GARNL3-220ENST00000496711 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
GARNL3-220ENST00000496711 TSGA10IPQ3SY00 556 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 TICAM2Q86XR7 235 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 CCDC83Q8IWF9 413 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 PAG1Q9NWQ8 432 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
GARNL3-220ENST00000496711 ANKRD1Q15327 319 aa15.6■□□□□ 0.09
GARNL3-220ENST00000496711 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
GARNL3-220ENST00000496711 MCMDC2Q4G0Z9 681 aa15.6■□□□□ 0.09
GARNL3-220ENST00000496711 GIGYF2Q6Y7W6 1299 aaKnown RBP15.6■□□□□ 0.09
GARNL3-220ENST00000496711 ZBTB38Q8NAP3 1195 aaPredicted RBP15.6■□□□□ 0.09
GARNL3-220ENST00000496711 CICQ96RK0 1608 aaPredicted RBP15.6■□□□□ 0.09
GARNL3-220ENST00000496711 CDHR2Q9BYE9 1310 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 A0A1B0GUL7 405 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 EXOC5O00471 708 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 STX6O43752 255 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 ZSCAN22P10073 491 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 RPS6KB1P23443 525 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 KRT32Q14532 448 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 HSP90AB3PQ58FF7 597 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 ALDH8A1Q9H2A2 487 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 NWD2Q9ULI1 1742 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 CYP19A1P11511 503 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 SYT1P21579 422 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 TIMM10P62072 90 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 ME3Q16798 604 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
GARNL3-220ENST00000496711 RREB1Q92766 1687 aa15.59■□□□□ 0.09
GARNL3-220ENST00000496711 LTBP4Q8N2S1 1624 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 GOLIM4O00461 696 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 GJB2P29033 226 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 ST3GAL1Q11201 340 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 CCDC129Q6ZRS4 1044 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 FAM89AQ96GI7 184 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 CEP126Q9P2H0 1117 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 TPCN1Q9ULQ1 816 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 TAF6LQ9Y6J9 622 aa15.58■□□□□ 0.08
GARNL3-220ENST00000496711 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
GARNL3-220ENST00000496711 SEC62Q99442 399 aaKnown RBP15.57■□□□□ 0.08
GARNL3-220ENST00000496711 HELLSQ9NRZ9 838 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 RBM27Q9P2N5 1060 aaKnown RBP15.57■□□□□ 0.08
GARNL3-220ENST00000496711 RIC1Q4ADV7 1423 aa15.57■□□□□ 0.08
GARNL3-220ENST00000496711 LRP5O75197 1615 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms