RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 CT47B1P0C2W7 299 aaPredicted RBP7.67□□□□□ -1.18
SSBP1-213ENST00000496622 ZBTB40Q9NUA8 1239 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 KIF16BQ96L93 1317 aa7.67□□□□□ -1.18
SSBP1-213ENST00000496622 ALDH1L2Q3SY69 923 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
SSBP1-213ENST00000496622 CAMTA1Q9Y6Y1 1673 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 SPATA31A3Q5VYP0 1347 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
SSBP1-213ENST00000496622 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
SSBP1-213ENST00000496622 SLC39A6Q13433 755 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 STRN4Q9NRL3 753 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 NFAT5O94916 1531 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 USP19O94966 1318 aa7.66□□□□□ -1.18
SSBP1-213ENST00000496622 GPATCH11Q8N954 259 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 PHAXQ9H814 394 aaKnown RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 DDX19BQ9UMR2 479 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 PDZRN3Q9UPQ7 1066 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 MARF1Q9Y4F3 1742 aaKnown RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 APBB1O00213 710 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 PIP4K2AP48426 406 aaPredicted RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 TTLL12Q14166 644 aaPredicted RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 TAF7Q15545 349 aaPredicted RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 CC2D2BQ6DHV5 1058 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 SIRT2Q8IXJ6 389 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 DNAJC2Q99543 621 aaKnown RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 BACH2Q9BYV9 841 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 GPBP1L1Q9HC44 474 aaPredicted RBP7.65□□□□□ -1.18
SSBP1-213ENST00000496622 PRDM11Q9NQV5 511 aa7.65□□□□□ -1.18
SSBP1-213ENST00000496622 MAP3K5Q99683 1374 aa7.65□□□□□ -1.19
SSBP1-213ENST00000496622 PPP4CP60510 307 aa7.65□□□□□ -1.19
SSBP1-213ENST00000496622 MLLT1Q03111 559 aaPredicted RBP7.65□□□□□ -1.19
SSBP1-213ENST00000496622 PXDNQ92626 1479 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 TEFQ10587 303 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
SSBP1-213ENST00000496622 MEIS3Q99687 375 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 EP400Q96L91 3159 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 BTBD11A6QL63 1104 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 TRIM66O15016 1216 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 FKBP5Q13451 457 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-213ENST00000496622 NFATC2IPQ8NCF5 419 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 RAPGEF4Q8WZA2 1011 aa7.64□□□□□ -1.19
SSBP1-213ENST00000496622 ZHX1Q9UKY1 873 aaPredicted RBP7.64□□□□□ -1.19
SSBP1-213ENST00000496622 SETQ01105 290 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-213ENST00000496622 C8orf34Q49A92 452 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 PLEKHO1Q53GL0 409 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-213ENST00000496622 C1orf141Q5JVX7 400 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 DNAJC5GQ8N7S2 189 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 HLA-CQ95604 372 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
SSBP1-213ENST00000496622 HCSTQ9UBK5 93 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 TSR3Q9UJK0 312 aaKnown RBP7.63□□□□□ -1.19
SSBP1-213ENST00000496622 RGPD1P0DJD0 1748 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 CYP27B1O15528 508 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 RGS19P49795 217 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 COPS2P61201 443 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 TOM1L2Q6ZVM7 507 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 RDH13Q8NBN7 331 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 RTL1A6NKG5 1358 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 KIF24Q5T7B8 1368 aa7.63□□□□□ -1.19
SSBP1-213ENST00000496622 SHANK3Q9BYB0 1731 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
SSBP1-213ENST00000496622 SLC4A3P48751 1232 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 PROSER3Q2NL68 480 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 AKAP4Q5JQC9 854 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 LARP1Q6PKG0 1096 aaKnown RBP7.62□□□□□ -1.19
SSBP1-213ENST00000496622 DDX54Q8TDD1 881 aaKnown RBP7.62□□□□□ -1.19
SSBP1-213ENST00000496622 CHPF2Q9P2E5 772 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 ABCC4O15439 1325 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 CFHP08603 1231 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 BRPF1P55201 1214 aaPredicted RBP7.62□□□□□ -1.19
SSBP1-213ENST00000496622 EIF4A1P60842 406 aaKnown RBP7.62□□□□□ -1.19
SSBP1-213ENST00000496622 FLIIQ13045 1269 aa7.62□□□□□ -1.19
SSBP1-213ENST00000496622 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-213ENST00000496622 ANKRD45Q5TZF3 282 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 MPNDQ8N594 471 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 ZNF516Q92618 1163 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 ARHGAP45Q92619 1136 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 STK31Q9BXU1 1019 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 PDCL3Q9H2J4 239 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-213ENST00000496622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
SSBP1-213ENST00000496622 MS4A1P11836 297 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 C16orf71Q8IYS4 520 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-213ENST00000496622 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
SSBP1-213ENST00000496622 LTN1O94822 1766 aa7.61□□□□□ -1.19
SSBP1-213ENST00000496622 CEMIPQ8WUJ3 1361 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 RGPD2P0DJD1 1756 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 HTATSF1O43719 755 aaKnown RBP7.6□□□□□ -1.19
SSBP1-213ENST00000496622 ADAMTS2O95450 1211 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 AIMP1Q12904 312 aaKnown RBP7.6□□□□□ -1.19
SSBP1-213ENST00000496622 AMOTQ4VCS5 1084 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 MEGF6O75095 1541 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 EVA1CP58658 441 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 FUT2Q10981 343 aa7.6□□□□□ -1.19
SSBP1-213ENST00000496622 CCDC30Q5VVM6 783 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms