RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
UBXN11-216ENST00000496466 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
UBXN11-216ENST00000496466 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
UBXN11-216ENST00000496466 SLC27A2O14975 620 aa17.88■□□□□ 0.45
UBXN11-216ENST00000496466 F13A1P00488 732 aa17.88■□□□□ 0.45
UBXN11-216ENST00000496466 KCNJ4P48050 445 aa17.88■□□□□ 0.45
UBXN11-216ENST00000496466 PAPPAQ13219 1627 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 GJB2P29033 226 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 NAP1L5Q96NT1 182 aaPredicted RBP17.87■□□□□ 0.45
UBXN11-216ENST00000496466 ZBTB3Q9H5J0 574 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 TNS2Q63HR2 1409 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 ST3GAL1Q11201 340 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 HS1BP3Q53T59 392 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 TSPY26PQ9H489 355 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
UBXN11-216ENST00000496466 COL15A1P39059 1388 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 H7C1W4 665 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 TFCP2Q12800 502 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 ME3Q16798 604 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 LMBR1LQ6UX01 489 aa17.86■□□□□ 0.45
UBXN11-216ENST00000496466 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
UBXN11-216ENST00000496466 FOXO4P98177 505 aa17.85■□□□□ 0.45
UBXN11-216ENST00000496466 PHF14O94880 888 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 PSMA5P28066 241 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 PIGBQ92521 554 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
UBXN11-216ENST00000496466 DBNLQ9UJU6 430 aaKnown RBP17.84■□□□□ 0.45
UBXN11-216ENST00000496466 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 TPCN1Q9ULQ1 816 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 MTMR6Q9Y217 621 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 DTNBO60941 627 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 ATP5JP18859 108 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
UBXN11-216ENST00000496466 RNF214Q8ND24 703 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 EDC3Q96F86 508 aaKnown RBP17.84■□□□□ 0.45
UBXN11-216ENST00000496466 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 JCADQ9P266 1359 aa17.84■□□□□ 0.45
UBXN11-216ENST00000496466 ZNF589Q86UQ0 364 aaPredicted RBP17.83■□□□□ 0.45
UBXN11-216ENST00000496466 NECAB1Q8N987 351 aa17.83■□□□□ 0.45
UBXN11-216ENST00000496466 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.45
UBXN11-216ENST00000496466 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
UBXN11-216ENST00000496466 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
UBXN11-216ENST00000496466 UBE2HP62256 183 aa17.82■□□□□ 0.44
UBXN11-216ENST00000496466 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
UBXN11-216ENST00000496466 TAF6LQ9Y6J9 622 aa17.82■□□□□ 0.44
UBXN11-216ENST00000496466 MSNP26038 577 aaKnown RBP17.82■□□□□ 0.44
UBXN11-216ENST00000496466 CCDC183Q5T5S1 534 aa17.82■□□□□ 0.44
UBXN11-216ENST00000496466 BLOC1S2Q6QNY1 142 aa17.82■□□□□ 0.44
UBXN11-216ENST00000496466 TAF5LO75529 589 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 DNAJC10Q8IXB1 793 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 ALDH8A1Q9H2A2 487 aaPredicted RBP17.81■□□□□ 0.44
UBXN11-216ENST00000496466 FIBPO43427 364 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 RPS6KB1P23443 525 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
UBXN11-216ENST00000496466 NOL7Q9UMY1 257 aaKnown RBP17.81■□□□□ 0.44
UBXN11-216ENST00000496466 DNM1Q05193 864 aaKnown RBP17.8■□□□□ 0.44
UBXN11-216ENST00000496466 CCDC191Q8NCU4 936 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 ANKRD1Q15327 319 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 USPL1Q5W0Q7 1092 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 DBNDD2Q9BQY9 259 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
UBXN11-216ENST00000496466 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
UBXN11-216ENST00000496466 TJP1Q07157 1748 aa17.79■□□□□ 0.44
UBXN11-216ENST00000496466 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
UBXN11-216ENST00000496466 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
UBXN11-216ENST00000496466 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
UBXN11-216ENST00000496466 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 ATG9AQ7Z3C6 839 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 RFX7Q2KHR2 1363 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 LETM1O95202 739 aaPredicted RBP17.78■□□□□ 0.44
UBXN11-216ENST00000496466 HAUS7Q99871 368 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 CCDC9Q9Y3X0 531 aaKnown RBP17.78■□□□□ 0.44
UBXN11-216ENST00000496466 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
UBXN11-216ENST00000496466 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
UBXN11-216ENST00000496466 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.44
UBXN11-216ENST00000496466 DNAJC2Q99543 621 aaKnown RBP17.77■□□□□ 0.44
UBXN11-216ENST00000496466 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
UBXN11-216ENST00000496466 ROBO1Q9Y6N7 1651 aa17.77■□□□□ 0.44
UBXN11-216ENST00000496466 TCIRG1Q13488 830 aa17.77■□□□□ 0.43
UBXN11-216ENST00000496466 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.43
UBXN11-216ENST00000496466 ZNF609O15014 1411 aa17.77■□□□□ 0.43
UBXN11-216ENST00000496466 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
UBXN11-216ENST00000496466 CCDC39Q9UFE4 941 aa17.76■□□□□ 0.43
UBXN11-216ENST00000496466 COL14A1Q05707 1796 aaKnown RBP17.76■□□□□ 0.43
UBXN11-216ENST00000496466 CHGBP05060 677 aa17.76■□□□□ 0.43
UBXN11-216ENST00000496466 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
UBXN11-216ENST00000496466 UVSSAQ2YD98 709 aa17.76■□□□□ 0.43
UBXN11-216ENST00000496466 TEX13AQ9BXU3 409 aaPredicted RBP17.76■□□□□ 0.43
UBXN11-216ENST00000496466 KRT32Q14532 448 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 LRRC24Q50LG9 513 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 ZKSCAN5Q9Y2L8 839 aa17.75■□□□□ 0.43
UBXN11-216ENST00000496466 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
UBXN11-216ENST00000496466 OFD1O75665 1012 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms