RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 DNAJB12Q9NXW2 375 aaKnown RBP10.94□□□□□ -0.66
SF3B1-212ENST00000496458 MKL2Q9ULH7 1088 aa10.94□□□□□ -0.66
SF3B1-212ENST00000496458 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
SF3B1-212ENST00000496458 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
SF3B1-212ENST00000496458 MAP3K6O95382 1288 aa10.92□□□□□ -0.66
SF3B1-212ENST00000496458 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
SF3B1-212ENST00000496458 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
SF3B1-212ENST00000496458 SLC6A14Q9UN76 642 aa10.92□□□□□ -0.66
SF3B1-212ENST00000496458 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
SF3B1-212ENST00000496458 ARID4AP29374 1257 aaPredicted RBP10.91□□□□□ -0.66
SF3B1-212ENST00000496458 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
SF3B1-212ENST00000496458 SERPINB4P48594 390 aa10.91□□□□□ -0.66
SF3B1-212ENST00000496458 KANK3Q6NY19 840 aa10.91□□□□□ -0.66
SF3B1-212ENST00000496458 LINC00114Q6XXX2 140 aa10.91□□□□□ -0.66
SF3B1-212ENST00000496458 ALBP02768 609 aa10.9□□□□□ -0.66
SF3B1-212ENST00000496458 GSK3AP49840 483 aa10.9□□□□□ -0.66
SF3B1-212ENST00000496458 SF3B2Q13435 895 aaKnown RBP10.9□□□□□ -0.66
SF3B1-212ENST00000496458 EDEM1Q92611 657 aa10.9□□□□□ -0.66
SF3B1-212ENST00000496458 NUDT16Q96DE0 195 aaKnown RBP10.9□□□□□ -0.66
SF3B1-212ENST00000496458 M0R082 166 aa10.89□□□□□ -0.67
SF3B1-212ENST00000496458 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B1-212ENST00000496458 RASSF7Q02833 373 aa10.89□□□□□ -0.67
SF3B1-212ENST00000496458 MLLT1Q03111 559 aaPredicted RBP10.89□□□□□ -0.67
SF3B1-212ENST00000496458 DNM1Q05193 864 aaKnown RBP10.89□□□□□ -0.67
SF3B1-212ENST00000496458 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
SF3B1-212ENST00000496458 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
SF3B1-212ENST00000496458 ZNF587Q96SQ5 575 aaPredicted RBP10.89□□□□□ -0.67
SF3B1-212ENST00000496458 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
SF3B1-212ENST00000496458 GNB5O14775 395 aa10.88□□□□□ -0.67
SF3B1-212ENST00000496458 MMP20O60882 483 aa10.88□□□□□ -0.67
SF3B1-212ENST00000496458 AAMPQ13685 434 aa10.88□□□□□ -0.67
SF3B1-212ENST00000496458 NAGPAQ9UK23 515 aa10.88□□□□□ -0.67
SF3B1-212ENST00000496458 ZBTB42B2RXF5 422 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 FAM13AO94988 1023 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 NPR3P17342 541 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 ALKBH2Q6NS38 261 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 FAM35AQ86V20 835 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
SF3B1-212ENST00000496458 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
SF3B1-212ENST00000496458 H3BRB1 525 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 PIK3R2O00459 728 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 PDGFAP04085 211 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 PSAPP07602 524 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 CPB1P15086 417 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 GPLD1P80108 840 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 PCSK7Q16549 785 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 TRPM4Q8TD43 1214 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 NUDT8Q8WV74 236 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 SUV39H2Q9H5I1 410 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 TUT1Q9H6E5 874 aaKnown RBP10.86□□□□□ -0.67
SF3B1-212ENST00000496458 EGFL7Q9UHF1 273 aa10.86□□□□□ -0.67
SF3B1-212ENST00000496458 GDF11O95390 407 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 PCSK2P16519 638 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 MZF1P28698 734 aaPredicted RBP10.85□□□□□ -0.67
SF3B1-212ENST00000496458 PLAURQ03405 335 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 PSAPL1Q6NUJ1 521 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 C20orf204Q6ZNR8 217 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 HFE2Q6ZVN8 426 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 TXNDC2Q86VQ3 553 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 TMEM151AQ8N4L1 468 aa10.85□□□□□ -0.67
SF3B1-212ENST00000496458 ICMTO60725 284 aa10.84□□□□□ -0.67
SF3B1-212ENST00000496458 NRLP54845 237 aa10.84□□□□□ -0.67
SF3B1-212ENST00000496458 GLYCTKQ8IVS8 523 aa10.84□□□□□ -0.67
SF3B1-212ENST00000496458 TRIM11Q96F44 468 aa10.84□□□□□ -0.67
SF3B1-212ENST00000496458 NSUN5Q96P11 429 aaKnown RBP10.84□□□□□ -0.67
SF3B1-212ENST00000496458 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
SF3B1-212ENST00000496458 POLIQ9UNA4 740 aa10.84□□□□□ -0.67
SF3B1-212ENST00000496458 LILRB5O75023 590 aa10.83□□□□□ -0.68
SF3B1-212ENST00000496458 A6NHS1 94 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 BRD1O95696 1058 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 RPLP1P05386 114 aaKnown RBP10.82□□□□□ -0.68
SF3B1-212ENST00000496458 COL8A1P27658 744 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 SOX18P35713 384 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 C8orf34Q49A92 452 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 PERM1Q5SV97 790 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 TTC39BQ5VTQ0 682 aaPredicted RBP10.82□□□□□ -0.68
SF3B1-212ENST00000496458 PDE12Q6L8Q7 609 aaKnown RBP10.82□□□□□ -0.68
SF3B1-212ENST00000496458 ZNF438Q7Z4V0 828 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 TTC16Q8NEE8 873 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 CCER1Q8TC90 406 aaPredicted RBP10.82□□□□□ -0.68
SF3B1-212ENST00000496458 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
SF3B1-212ENST00000496458 FZD6O60353 706 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 RGS9O75916 674 aaPredicted RBP10.81□□□□□ -0.68
SF3B1-212ENST00000496458 EIF2AK2P19525 551 aaKnown RBP10.81□□□□□ -0.68
SF3B1-212ENST00000496458 OR13H1Q8NG92 308 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 PLVAPQ9BX97 442 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 ELP3Q9H9T3 547 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 CCDC87Q9NVE4 849 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 ABI2Q9NYB9 513 aaPredicted RBP10.81□□□□□ -0.68
SF3B1-212ENST00000496458 NOP53Q9NZM5 478 aaKnown RBP10.81□□□□□ -0.68
SF3B1-212ENST00000496458 TMEM63CQ9P1W3 806 aa10.81□□□□□ -0.68
SF3B1-212ENST00000496458 J3QW42 95 aa10.8□□□□□ -0.68
SF3B1-212ENST00000496458 COL9A3Q14050 684 aaPredicted RBP10.8□□□□□ -0.68
SF3B1-212ENST00000496458 ELMSAN1Q6PJG2 1045 aa10.8□□□□□ -0.68
SF3B1-212ENST00000496458 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
SF3B1-212ENST00000496458 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
SF3B1-212ENST00000496458 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms