RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
PRPF3-207ENST00000496202 CTSWP56202 376 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 CRY2Q49AN0 593 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
PRPF3-207ENST00000496202 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
PRPF3-207ENST00000496202 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 BCS1LQ9Y276 419 aa12.17□□□□□ -0.46
PRPF3-207ENST00000496202 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
PRPF3-207ENST00000496202 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-207ENST00000496202 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
PRPF3-207ENST00000496202 PLIN1O60240 522 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 KCNA3P22001 575 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 ALDH1B1P30837 517 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 CASP7P55210 303 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 SF3B3Q15393 1217 aaKnown RBP12.15□□□□□ -0.46
PRPF3-207ENST00000496202 PRPF40BQ6NWY9 871 aaKnown RBP12.15□□□□□ -0.46
PRPF3-207ENST00000496202 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
PRPF3-207ENST00000496202 CHMP3Q9Y3E7 222 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
PRPF3-207ENST00000496202 UTYO14607 1347 aa12.14□□□□□ -0.47
PRPF3-207ENST00000496202 GNAI3P08754 354 aa12.14□□□□□ -0.47
PRPF3-207ENST00000496202 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-207ENST00000496202 RLBP1P12271 317 aa12.14□□□□□ -0.47
PRPF3-207ENST00000496202 HOXA10P31260 410 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-207ENST00000496202 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-207ENST00000496202 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
PRPF3-207ENST00000496202 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
PRPF3-207ENST00000496202 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-207ENST00000496202 TAF1P21675 1872 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 PPEF1O14829 653 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-207ENST00000496202 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
PRPF3-207ENST00000496202 GRAPQ13588 217 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-207ENST00000496202 SUCLG2Q96I99 432 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 CDC5LQ99459 802 aaKnown RBP12.13□□□□□ -0.47
PRPF3-207ENST00000496202 MEIS3Q99687 375 aa12.13□□□□□ -0.47
PRPF3-207ENST00000496202 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 YBX3P16989 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRPF3-207ENST00000496202 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 TAF7LQ5H9L4 462 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 TTLL11Q8NHH1 800 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 RTL9Q8NET4 1388 aa12.12□□□□□ -0.47
PRPF3-207ENST00000496202 ANKRD18BA2A2Z9 1011 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 C21orf2O43822 256 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 BBOX1O75936 387 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 FOXO4P98177 505 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 IFIT5Q13325 482 aaKnown RBP12.11□□□□□ -0.47
PRPF3-207ENST00000496202 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
PRPF3-207ENST00000496202 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
PRPF3-207ENST00000496202 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
PRPF3-207ENST00000496202 GREM2Q9H772 168 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
PRPF3-207ENST00000496202 GNAI2P04899 355 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 CSF1RP07333 972 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 ITGA6P23229 1130 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 IGHMBP2P38935 993 aaKnown RBP12.1□□□□□ -0.47
PRPF3-207ENST00000496202 RPS8P62241 208 aaKnown RBP12.1□□□□□ -0.47
PRPF3-207ENST00000496202 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 EPHA10Q5JZY3 1008 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 ARHGAP27Q6ZUM4 889 aa12.1□□□□□ -0.47
PRPF3-207ENST00000496202 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
PRPF3-207ENST00000496202 CC2D2BQ6DHV5 1058 aa12.09□□□□□ -0.47
PRPF3-207ENST00000496202 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
PRPF3-207ENST00000496202 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
PRPF3-207ENST00000496202 CHD4Q14839 1912 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
PRPF3-207ENST00000496202 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
PRPF3-207ENST00000496202 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 C20orf194Q5TEA3 1177 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 ATP6V0A2Q9Y487 856 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
PRPF3-207ENST00000496202 FER1L6Q2WGJ9 1857 aa12.08□□□□□ -0.48
PRPF3-207ENST00000496202 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
PRPF3-207ENST00000496202 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
PRPF3-207ENST00000496202 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
PRPF3-207ENST00000496202 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
PRPF3-207ENST00000496202 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
PRPF3-207ENST00000496202 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 DPP8Q6V1X1 898 aaPredicted RBP12.06□□□□□ -0.48
PRPF3-207ENST00000496202 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
PRPF3-207ENST00000496202 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms