RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
HDAC9-226ENST00000496026 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
HDAC9-226ENST00000496026 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
HDAC9-226ENST00000496026 ALDH1B1P30837 517 aa18.52■□□□□ 0.56
HDAC9-226ENST00000496026 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
HDAC9-226ENST00000496026 DALRD3Q5D0E6 543 aaKnown RBP18.52■□□□□ 0.56
HDAC9-226ENST00000496026 TTLL11Q8NHH1 800 aa18.52■□□□□ 0.56
HDAC9-226ENST00000496026 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
HDAC9-226ENST00000496026 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.55
HDAC9-226ENST00000496026 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
HDAC9-226ENST00000496026 FOXO4P98177 505 aa18.51■□□□□ 0.55
HDAC9-226ENST00000496026 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
HDAC9-226ENST00000496026 CRAMP1Q96RY5 1269 aa18.51■□□□□ 0.55
HDAC9-226ENST00000496026 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
HDAC9-226ENST00000496026 KIAA1551Q9HCM1 1747 aa18.51■□□□□ 0.55
HDAC9-226ENST00000496026 GPR162Q16538 588 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
HDAC9-226ENST00000496026 LMBR1LQ6UX01 489 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 GREM2Q9H772 168 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 DDX19BQ9UMR2 479 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 LAMB2P55268 1798 aa18.5■□□□□ 0.55
HDAC9-226ENST00000496026 COL11A2P13942 1736 aaPredicted RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
HDAC9-226ENST00000496026 ZBTB7BO15156 539 aaPredicted RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 CSF1RP07333 972 aa18.49■□□□□ 0.55
HDAC9-226ENST00000496026 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
HDAC9-226ENST00000496026 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
HDAC9-226ENST00000496026 GNAI2P04899 355 aa18.48■□□□□ 0.55
HDAC9-226ENST00000496026 GRAPQ13588 217 aa18.48■□□□□ 0.55
HDAC9-226ENST00000496026 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
HDAC9-226ENST00000496026 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
HDAC9-226ENST00000496026 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
HDAC9-226ENST00000496026 PPEF1O14829 653 aaPredicted RBP18.47■□□□□ 0.55
HDAC9-226ENST00000496026 ITGA6P23229 1130 aa18.47■□□□□ 0.55
HDAC9-226ENST00000496026 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
HDAC9-226ENST00000496026 CCDC57Q2TAC2 916 aa18.47■□□□□ 0.55
HDAC9-226ENST00000496026 CDC5LQ99459 802 aaKnown RBP18.47■□□□□ 0.55
HDAC9-226ENST00000496026 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 BBOX1O75936 387 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
HDAC9-226ENST00000496026 TAF7LQ5H9L4 462 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
HDAC9-226ENST00000496026 CELF1Q92879 486 aaKnown RBP18.46■□□□□ 0.55
HDAC9-226ENST00000496026 TMX4Q9H1E5 349 aaPredicted RBP18.46■□□□□ 0.55
HDAC9-226ENST00000496026 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
HDAC9-226ENST00000496026 DLEC1Q9Y238 1755 aa18.45■□□□□ 0.54
HDAC9-226ENST00000496026 C21orf2O43822 256 aa18.45■□□□□ 0.54
HDAC9-226ENST00000496026 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC9-226ENST00000496026 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
HDAC9-226ENST00000496026 IGHMBP2P38935 993 aaKnown RBP18.44■□□□□ 0.54
HDAC9-226ENST00000496026 TMC4Q7Z404 712 aa18.44■□□□□ 0.54
HDAC9-226ENST00000496026 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
HDAC9-226ENST00000496026 GRIN3BO60391 1043 aa18.43■□□□□ 0.54
HDAC9-226ENST00000496026 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
HDAC9-226ENST00000496026 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
HDAC9-226ENST00000496026 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
HDAC9-226ENST00000496026 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
HDAC9-226ENST00000496026 ATP6V0A2Q9Y487 856 aa18.42■□□□□ 0.54
HDAC9-226ENST00000496026 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 CC2D2BQ6DHV5 1058 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 OLFM4Q6UX06 510 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 ARHGAP27Q6ZUM4 889 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 SP8Q8IXZ3 490 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 C7orf43Q8WVR3 580 aa18.41■□□□□ 0.54
HDAC9-226ENST00000496026 BRCA1P38398 1863 aaKnown RBP18.4■□□□□ 0.54
HDAC9-226ENST00000496026 SRGAP3O43295 1099 aa18.4■□□□□ 0.54
HDAC9-226ENST00000496026 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
HDAC9-226ENST00000496026 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
HDAC9-226ENST00000496026 MYH3P11055 1940 aa18.4■□□□□ 0.54
HDAC9-226ENST00000496026 SLX4Q8IY92 1834 aa18.39■□□□□ 0.54
HDAC9-226ENST00000496026 MTX1Q13505 466 aa18.39■□□□□ 0.53
HDAC9-226ENST00000496026 LDHAL6AQ6ZMR3 332 aa18.39■□□□□ 0.53
HDAC9-226ENST00000496026 RTKN2Q8IZC4 609 aa18.39■□□□□ 0.53
HDAC9-226ENST00000496026 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
HDAC9-226ENST00000496026 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
HDAC9-226ENST00000496026 CNNM1Q9NRU3 951 aa18.38■□□□□ 0.53
HDAC9-226ENST00000496026 COL4A1P02462 1669 aa18.38■□□□□ 0.53
HDAC9-226ENST00000496026 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
HDAC9-226ENST00000496026 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
HDAC9-226ENST00000496026 CEP85Q6P2H3 762 aa18.37■□□□□ 0.53
HDAC9-226ENST00000496026 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
HDAC9-226ENST00000496026 CACNA1SQ13698 1873 aa18.37■□□□□ 0.53
HDAC9-226ENST00000496026 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
HDAC9-226ENST00000496026 RFX5P48382 616 aaPredicted RBP18.36■□□□□ 0.53
HDAC9-226ENST00000496026 DPP8Q6V1X1 898 aaPredicted RBP18.36■□□□□ 0.53
HDAC9-226ENST00000496026 MPNDQ8N594 471 aa18.36■□□□□ 0.53
HDAC9-226ENST00000496026 ANKIB1Q9P2G1 1089 aa18.36■□□□□ 0.53
HDAC9-226ENST00000496026 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
HDAC9-226ENST00000496026 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
HDAC9-226ENST00000496026 TAF1P21675 1872 aa18.35■□□□□ 0.53
HDAC9-226ENST00000496026 GPSM2P81274 684 aa18.35■□□□□ 0.53
HDAC9-226ENST00000496026 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDAC9-226ENST00000496026 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
HDAC9-226ENST00000496026 RPAP2Q8IXW5 612 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms