RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 CNTN3Q9P232 1028 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 ZFATQ9P243 1243 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 NXF1Q9UBU9 619 aaKnown RBP6.65□□□□□ -1.34
ERCC8-207ENST00000495985 ATXN7L1Q9ULK2 861 aaPredicted RBP6.65□□□□□ -1.34
ERCC8-207ENST00000495985 SPEM2Q0P670 501 aa6.64□□□□□ -1.35
ERCC8-207ENST00000495985 CCINQ13939 588 aa6.64□□□□□ -1.35
ERCC8-207ENST00000495985 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
ERCC8-207ENST00000495985 PDE12Q6L8Q7 609 aaKnown RBP6.64□□□□□ -1.35
ERCC8-207ENST00000495985 C1orf127Q8N9H9 656 aa6.64□□□□□ -1.35
ERCC8-207ENST00000495985 NANOS1Q8WY41 292 aaKnown RBP6.64□□□□□ -1.35
ERCC8-207ENST00000495985 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
ERCC8-207ENST00000495985 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-207ENST00000495985 PNMA6FA0A0J9YX94 578 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 C2CD2LO14523 706 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 EIF1AYO14602 144 aaKnown RBP6.63□□□□□ -1.35
ERCC8-207ENST00000495985 NFKB1P19838 968 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 LAMC2Q13753 1193 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 COL19A1Q14993 1142 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 NLRP13Q86W25 1043 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 BHMTQ93088 406 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 TRERF1Q96PN7 1200 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
ERCC8-207ENST00000495985 LOC105371045A0A1W2PR82 267 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 MMP20O60882 483 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 CYP2E1P05181 493 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 LDHBP07195 334 aaKnown RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 VAMP1P23763 118 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 GAS6Q14393 721 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 ENOX2Q16206 610 aaKnown RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 ZNF326Q5BKZ1 582 aaKnown RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 ZFYVE28Q9HCC9 887 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 ABI2Q9NYB9 513 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-207ENST00000495985 PHF24Q9UPV7 400 aa6.62□□□□□ -1.35
ERCC8-207ENST00000495985 EREGO14944 169 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
ERCC8-207ENST00000495985 PHACTR2O75167 634 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 RARAP10276 462 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
ERCC8-207ENST00000495985 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 CHRDQ9H2X0 955 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 C11orf16Q9NQ32 467 aa6.61□□□□□ -1.35
ERCC8-207ENST00000495985 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
ERCC8-207ENST00000495985 H3BM21 787 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 FAM161BQ96MY7 647 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 DUSP9Q99956 384 aaKnown RBP6.6□□□□□ -1.35
ERCC8-207ENST00000495985 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 KANSL3Q9P2N6 904 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 PRR12Q9ULL5 1215 aa6.6□□□□□ -1.35
ERCC8-207ENST00000495985 ERBB4Q15303 1308 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
ERCC8-207ENST00000495985 NEFLP07196 543 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 TCF3P15923 654 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 MX2P20592 715 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 IRS1P35568 1242 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 PCBP4P57723 403 aaKnown RBP6.59□□□□□ -1.35
ERCC8-207ENST00000495985 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 FAM182BQ5T319 152 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 EPS8L3Q8TE67 593 aaKnown RBP6.59□□□□□ -1.35
ERCC8-207ENST00000495985 CCDC74AQ96AQ1 378 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 DNAJC25Q9H1X3 360 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
ERCC8-207ENST00000495985 PRPF40AO75400 957 aaKnown RBP6.58□□□□□ -1.36
ERCC8-207ENST00000495985 RECKO95980 971 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 BMP4P12644 408 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 CES1P23141 567 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 ATP2B2Q01814 1243 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
ERCC8-207ENST00000495985 SYT9Q86SS6 491 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 OR13H1Q8NG92 308 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 LATS2Q9NRM7 1088 aa6.58□□□□□ -1.36
ERCC8-207ENST00000495985 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
ERCC8-207ENST00000495985 ZBTB42B2RXF5 422 aa6.57□□□□□ -1.36
ERCC8-207ENST00000495985 MLLT1Q03111 559 aaPredicted RBP6.57□□□□□ -1.36
ERCC8-207ENST00000495985 TBC1D8BQ0IIM8 1120 aa6.57□□□□□ -1.36
ERCC8-207ENST00000495985 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.57□□□□□ -1.36
ERCC8-207ENST00000495985 ALG1LQ6GMV1 187 aa6.57□□□□□ -1.36
ERCC8-207ENST00000495985 DHX32Q7L7V1 743 aaKnown RBP6.57□□□□□ -1.36
ERCC8-207ENST00000495985 NPAS3Q8IXF0 933 aa6.57□□□□□ -1.36
ERCC8-207ENST00000495985 COL25A1Q9BXS0 654 aaPredicted RBP6.57□□□□□ -1.36
ERCC8-207ENST00000495985 KLF15Q9UIH9 416 aa6.57□□□□□ -1.36
ERCC8-207ENST00000495985 MAP3K6O95382 1288 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 PSAPP07602 524 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 ACPPP15309 386 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
ERCC8-207ENST00000495985 HFE2Q6ZVN8 426 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 NSUN5Q96P11 429 aaKnown RBP6.56□□□□□ -1.36
ERCC8-207ENST00000495985 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 SALL4Q9UJQ4 1053 aa6.56□□□□□ -1.36
ERCC8-207ENST00000495985 PHF20L1A8MW92 1017 aa6.55□□□□□ -1.36
ERCC8-207ENST00000495985 J3QW42 95 aa6.55□□□□□ -1.36
ERCC8-207ENST00000495985 TRPA1O75762 1119 aa6.55□□□□□ -1.36
ERCC8-207ENST00000495985 VSIG8P0DPA2 414 aa6.55□□□□□ -1.36
ERCC8-207ENST00000495985 KRT76Q01546 638 aa6.55□□□□□ -1.36
ERCC8-207ENST00000495985 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
ERCC8-207ENST00000495985 NFX1Q12986 1120 aaKnown RBP6.55□□□□□ -1.36
ERCC8-207ENST00000495985 GALNT12Q8IXK2 581 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms