RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
RAPGEF3-215ENST00000495953 CCDC24Q8N4L8 307 aa19.38■□□□□ 0.69
RAPGEF3-215ENST00000495953 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
RAPGEF3-215ENST00000495953 TNRC6CQ9HCJ0 1690 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-215ENST00000495953 CSF1RP07333 972 aa19.37■□□□□ 0.69
RAPGEF3-215ENST00000495953 CTSWP56202 376 aa19.37■□□□□ 0.69
RAPGEF3-215ENST00000495953 CCDC152Q4G0S7 254 aa19.37■□□□□ 0.69
RAPGEF3-215ENST00000495953 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
RAPGEF3-215ENST00000495953 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
RAPGEF3-215ENST00000495953 A0A0G2JLW4 131 aa19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 H0YIN7 160 aa19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 FOXO4P98177 505 aa19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 KAZALD1Q96I82 304 aa19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 CRBNQ96SW2 442 aa19.36■□□□□ 0.69
RAPGEF3-215ENST00000495953 RTL9Q8NET4 1388 aa19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 NPR1P16066 1061 aa19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 DPEP1P16444 411 aa19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 TTLL11Q8NHH1 800 aa19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 RPGRQ92834 1020 aaKnown RBP19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 LRRFIP2Q9Y608 721 aaKnown RBP19.35■□□□□ 0.69
RAPGEF3-215ENST00000495953 COL11A2P13942 1736 aaPredicted RBP19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 SRGNP10124 158 aa19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 MASTLQ96GX5 879 aa19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 BICC1Q9H694 974 aaKnown RBP19.34■□□□□ 0.69
RAPGEF3-215ENST00000495953 MTX1Q13505 466 aa19.33■□□□□ 0.68
RAPGEF3-215ENST00000495953 EPHA10Q5JZY3 1008 aa19.33■□□□□ 0.68
RAPGEF3-215ENST00000495953 STYK1Q6J9G0 422 aa19.33■□□□□ 0.68
RAPGEF3-215ENST00000495953 LMBR1LQ6UX01 489 aa19.33■□□□□ 0.68
RAPGEF3-215ENST00000495953 C3orf67Q6ZVT6 689 aa19.33■□□□□ 0.68
RAPGEF3-215ENST00000495953 NEFLP07196 543 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 CHRNA5P30532 468 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 DDX46Q7L014 1031 aaKnown RBP19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 ANKRD44Q8N8A2 993 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 CACNA1SQ13698 1873 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
RAPGEF3-215ENST00000495953 KCNA3P22001 575 aa19.31■□□□□ 0.68
RAPGEF3-215ENST00000495953 RPAP2Q8IXW5 612 aaPredicted RBP19.31■□□□□ 0.68
RAPGEF3-215ENST00000495953 IFIT5Q13325 482 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-215ENST00000495953 CCDC57Q2TAC2 916 aa19.3■□□□□ 0.68
RAPGEF3-215ENST00000495953 CNKSR1Q969H4 720 aa19.3■□□□□ 0.68
RAPGEF3-215ENST00000495953 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-215ENST00000495953 ANKRD18BA2A2Z9 1011 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 ITGA6P23229 1130 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 TMC4Q7Z404 712 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 GREM2Q9H772 168 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 PIM2Q9P1W9 311 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 CHMP3Q9Y3E7 222 aa19.29■□□□□ 0.68
RAPGEF3-215ENST00000495953 BBOX1O75936 387 aa19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 GRAPQ13588 217 aa19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 FAM161AQ3B820 660 aa19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 GRAPLQ8TC17 118 aaPredicted RBP19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
RAPGEF3-215ENST00000495953 IRX6P78412 446 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-215ENST00000495953 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
RAPGEF3-215ENST00000495953 TTLL6Q8N841 843 aa19.27■□□□□ 0.68
RAPGEF3-215ENST00000495953 BCS1LQ9Y276 419 aa19.27■□□□□ 0.68
RAPGEF3-215ENST00000495953 TAF1P21675 1872 aa19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 SRGAP3O43295 1099 aa19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 HMMRO75330 724 aa19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 RPS8P62241 208 aaKnown RBP19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 ANKRD18AQ8IVF6 992 aa19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 CCDC85AQ96PX6 553 aaPredicted RBP19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 SEC31BQ9NQW1 1179 aa19.26■□□□□ 0.67
RAPGEF3-215ENST00000495953 IGHMBP2P38935 993 aaKnown RBP19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 POLA2Q14181 598 aa19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 TAF7LQ5H9L4 462 aa19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
RAPGEF3-215ENST00000495953 RFX5P48382 616 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF3-215ENST00000495953 DALRD3Q5D0E6 543 aaKnown RBP19.24■□□□□ 0.67
RAPGEF3-215ENST00000495953 ERICH6BQ5W0A0 696 aa19.24■□□□□ 0.67
RAPGEF3-215ENST00000495953 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 CELF1Q92879 486 aaKnown RBP19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 MPHOSPH8Q99549 860 aa19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 COPRSQ9NQ92 184 aa19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
RAPGEF3-215ENST00000495953 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 PTPN12Q05209 780 aaKnown RBP19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 PRPF40BQ6NWY9 871 aaKnown RBP19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 SBF1O95248 1867 aa19.22■□□□□ 0.67
RAPGEF3-215ENST00000495953 LRRC37AA6NMS7 1700 aa19.21■□□□□ 0.67
RAPGEF3-215ENST00000495953 SOGA3Q5TF21 947 aa19.21■□□□□ 0.67
RAPGEF3-215ENST00000495953 LDHAL6AQ6ZMR3 332 aa19.21■□□□□ 0.67
RAPGEF3-215ENST00000495953 SP8Q8IXZ3 490 aa19.21■□□□□ 0.67
RAPGEF3-215ENST00000495953 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms