RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
APTX-231ENST00000494973 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
APTX-231ENST00000494973 HCLS1P14317 486 aaPredicted RBP16.83■□□□□ 0.28
APTX-231ENST00000494973 PDE6BP35913 854 aa16.83■□□□□ 0.28
APTX-231ENST00000494973 IFIT5Q13325 482 aaKnown RBP16.83■□□□□ 0.28
APTX-231ENST00000494973 POLA2Q14181 598 aa16.83■□□□□ 0.28
APTX-231ENST00000494973 TTLL11Q8NHH1 800 aa16.83■□□□□ 0.28
APTX-231ENST00000494973 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
APTX-231ENST00000494973 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
APTX-231ENST00000494973 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
APTX-231ENST00000494973 EPHA10Q5JZY3 1008 aa16.82■□□□□ 0.28
APTX-231ENST00000494973 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
APTX-231ENST00000494973 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
APTX-231ENST00000494973 ZBTB7AO95365 584 aa16.81■□□□□ 0.28
APTX-231ENST00000494973 ERC1Q8IUD2 1116 aa16.81■□□□□ 0.28
APTX-231ENST00000494973 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
APTX-231ENST00000494973 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
APTX-231ENST00000494973 PNMA6EA0A0J9YXQ4 647 aa16.8■□□□□ 0.28
APTX-231ENST00000494973 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
APTX-231ENST00000494973 FAM161AQ3B820 660 aa16.8■□□□□ 0.28
APTX-231ENST00000494973 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
APTX-231ENST00000494973 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
APTX-231ENST00000494973 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
APTX-231ENST00000494973 PDGFDQ9GZP0 370 aaPredicted RBP16.8■□□□□ 0.28
APTX-231ENST00000494973 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
APTX-231ENST00000494973 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
APTX-231ENST00000494973 ITGA6P23229 1130 aa16.79■□□□□ 0.28
APTX-231ENST00000494973 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
APTX-231ENST00000494973 SIRT2Q8IXJ6 389 aa16.79■□□□□ 0.28
APTX-231ENST00000494973 SYNE4Q8N205 404 aa16.79■□□□□ 0.28
APTX-231ENST00000494973 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
APTX-231ENST00000494973 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
APTX-231ENST00000494973 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
APTX-231ENST00000494973 LRP5O75197 1615 aa16.78■□□□□ 0.28
APTX-231ENST00000494973 CIAO1O76071 339 aa16.78■□□□□ 0.28
APTX-231ENST00000494973 G3BP1Q13283 466 aaKnown RBP eCLIP16.78■□□□□ 0.28
APTX-231ENST00000494973 OS9Q13438 667 aaPredicted RBP16.78■□□□□ 0.28
APTX-231ENST00000494973 TMC4Q7Z404 712 aa16.78■□□□□ 0.28
APTX-231ENST00000494973 RBM17Q96I25 401 aaKnown RBP16.78■□□□□ 0.28
APTX-231ENST00000494973 GREM2Q9H772 168 aa16.78■□□□□ 0.28
APTX-231ENST00000494973 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
APTX-231ENST00000494973 KIF13BQ9NQT8 1826 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
APTX-231ENST00000494973 NPR1P16066 1061 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 ANKRD18AQ8IVF6 992 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.28
APTX-231ENST00000494973 KDM2BQ8NHM5 1336 aa16.76■□□□□ 0.27
APTX-231ENST00000494973 H0YIN7 160 aa16.76■□□□□ 0.27
APTX-231ENST00000494973 HOXA10P31260 410 aaPredicted RBP16.76■□□□□ 0.27
APTX-231ENST00000494973 RFX5P48382 616 aaPredicted RBP16.76■□□□□ 0.27
APTX-231ENST00000494973 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
APTX-231ENST00000494973 CRAMP1Q96RY5 1269 aa16.76■□□□□ 0.27
APTX-231ENST00000494973 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
APTX-231ENST00000494973 EYA2O00167 538 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 IL15P40933 162 aaPredicted RBP16.75■□□□□ 0.27
APTX-231ENST00000494973 GRAPQ13588 217 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 STYK1Q6J9G0 422 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 GRAPLQ8TC17 118 aaPredicted RBP16.75■□□□□ 0.27
APTX-231ENST00000494973 KIF1BPQ96EK5 621 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
APTX-231ENST00000494973 IGHDP01880 384 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 SRGNP10124 158 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 LDHAL6AQ6ZMR3 332 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
APTX-231ENST00000494973 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 TMX4Q9H1E5 349 aaPredicted RBP16.74■□□□□ 0.27
APTX-231ENST00000494973 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
APTX-231ENST00000494973 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 BBOX1O75936 387 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 TGFB2P61812 414 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
APTX-231ENST00000494973 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 CCDC24Q8N4L8 307 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 CNKSR1Q969H4 720 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
APTX-231ENST00000494973 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 DLEC1Q9Y238 1755 aa16.73■□□□□ 0.27
APTX-231ENST00000494973 C3orf67Q6ZVT6 689 aa16.72■□□□□ 0.27
APTX-231ENST00000494973 COL11A2P13942 1736 aaPredicted RBP16.72■□□□□ 0.27
APTX-231ENST00000494973 PTGER2P43116 358 aa16.71■□□□□ 0.27
APTX-231ENST00000494973 CLASRPQ8N2M8 674 aaKnown RBP16.71■□□□□ 0.27
APTX-231ENST00000494973 SIL1Q9H173 461 aa16.71■□□□□ 0.27
APTX-231ENST00000494973 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
APTX-231ENST00000494973 PA2G4Q9UQ80 394 aaKnown RBP16.71■□□□□ 0.27
APTX-231ENST00000494973 NUCB1Q02818 461 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 ANKRD2Q9GZV1 360 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
APTX-231ENST00000494973 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
APTX-231ENST00000494973 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
APTX-231ENST00000494973 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
APTX-231ENST00000494973 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
APTX-231ENST00000494973 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms