RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ALDH1L2Q3SY69 923 aa18.3■□□□□ 0.52
SCAP-213ENST00000494938 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
SCAP-213ENST00000494938 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
SCAP-213ENST00000494938 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
SCAP-213ENST00000494938 UBE3BQ7Z3V4 1068 aa18.29■□□□□ 0.52
SCAP-213ENST00000494938 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
SCAP-213ENST00000494938 BCL2L13Q9BXK5 485 aa18.29■□□□□ 0.52
SCAP-213ENST00000494938 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
SCAP-213ENST00000494938 KIF3CO14782 793 aa18.28■□□□□ 0.52
SCAP-213ENST00000494938 RPS8P62241 208 aaKnown RBP18.28■□□□□ 0.52
SCAP-213ENST00000494938 CCDC152Q4G0S7 254 aa18.28■□□□□ 0.52
SCAP-213ENST00000494938 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
SCAP-213ENST00000494938 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
SCAP-213ENST00000494938 IARSP41252 1262 aaKnown RBP18.27■□□□□ 0.52
SCAP-213ENST00000494938 CTSWP56202 376 aa18.27■□□□□ 0.52
SCAP-213ENST00000494938 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
SCAP-213ENST00000494938 PLA2G12BQ9BX93 195 aa18.27■□□□□ 0.52
SCAP-213ENST00000494938 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.52
SCAP-213ENST00000494938 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
SCAP-213ENST00000494938 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
SCAP-213ENST00000494938 PTPRCP08575 1304 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 CSF1RP07333 972 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 RARSP54136 660 aaKnown RBP18.25■□□□□ 0.51
SCAP-213ENST00000494938 BRPF1P55201 1214 aaPredicted RBP18.25■□□□□ 0.51
SCAP-213ENST00000494938 MPNDQ8N594 471 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 RRAGCQ9HB90 399 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
SCAP-213ENST00000494938 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 POTECB2RU33 542 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 FZD9O00144 591 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 FOXO4P98177 505 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 DPP8Q6V1X1 898 aaPredicted RBP18.24■□□□□ 0.51
SCAP-213ENST00000494938 SRCIN1Q9C0H9 1055 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 GREM2Q9H772 168 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 FER1L6Q2WGJ9 1857 aa18.24■□□□□ 0.51
SCAP-213ENST00000494938 SBF1O95248 1867 aa18.23■□□□□ 0.51
SCAP-213ENST00000494938 GPSM2P81274 684 aa18.23■□□□□ 0.51
SCAP-213ENST00000494938 DPY19L2Q6NUT2 758 aa18.23■□□□□ 0.51
SCAP-213ENST00000494938 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
SCAP-213ENST00000494938 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
SCAP-213ENST00000494938 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
SCAP-213ENST00000494938 COL4A1P02462 1669 aa18.22■□□□□ 0.51
SCAP-213ENST00000494938 GRM8O00222 908 aa18.22■□□□□ 0.51
SCAP-213ENST00000494938 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
SCAP-213ENST00000494938 EPHA10Q5JZY3 1008 aa18.22■□□□□ 0.51
SCAP-213ENST00000494938 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
SCAP-213ENST00000494938 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
SCAP-213ENST00000494938 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
SCAP-213ENST00000494938 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
SCAP-213ENST00000494938 POLLQ9UGP5 575 aa18.21■□□□□ 0.51
SCAP-213ENST00000494938 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
SCAP-213ENST00000494938 AOC3Q16853 763 aa18.2■□□□□ 0.5
SCAP-213ENST00000494938 JDP2Q8WYK2 163 aa18.2■□□□□ 0.5
SCAP-213ENST00000494938 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
SCAP-213ENST00000494938 UTYO14607 1347 aa18.2■□□□□ 0.5
SCAP-213ENST00000494938 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
SCAP-213ENST00000494938 ZNF541Q9H0D2 1346 aa18.2■□□□□ 0.5
SCAP-213ENST00000494938 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
SCAP-213ENST00000494938 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
SCAP-213ENST00000494938 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
SCAP-213ENST00000494938 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
SCAP-213ENST00000494938 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
SCAP-213ENST00000494938 CDC5LQ99459 802 aaKnown RBP18.19■□□□□ 0.5
SCAP-213ENST00000494938 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
SCAP-213ENST00000494938 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
SCAP-213ENST00000494938 LAMB2P55268 1798 aa18.19■□□□□ 0.5
SCAP-213ENST00000494938 COL4A5P29400 1685 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 ITGA6P23229 1130 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 USP44Q9H0E7 712 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
SCAP-213ENST00000494938 BCAR3O75815 825 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 TOMM70O94826 608 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 CACNA1SQ13698 1873 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
SCAP-213ENST00000494938 WTIPA6NIX2 430 aaPredicted RBP18.16■□□□□ 0.5
SCAP-213ENST00000494938 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
SCAP-213ENST00000494938 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
SCAP-213ENST00000494938 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
SCAP-213ENST00000494938 ARHGAP45Q92619 1136 aa18.16■□□□□ 0.5
SCAP-213ENST00000494938 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
SCAP-213ENST00000494938 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
SCAP-213ENST00000494938 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
SCAP-213ENST00000494938 ZNRF3Q9ULT6 936 aa18.16■□□□□ 0.5
SCAP-213ENST00000494938 EIF6P56537 245 aaKnown RBP18.15■□□□□ 0.5
SCAP-213ENST00000494938 GPC2Q8N158 579 aa18.15■□□□□ 0.5
SCAP-213ENST00000494938 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
SCAP-213ENST00000494938 TAF1P21675 1872 aa18.14■□□□□ 0.49
SCAP-213ENST00000494938 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
SCAP-213ENST00000494938 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
SCAP-213ENST00000494938 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
SCAP-213ENST00000494938 CXCL9Q07325 125 aa18.14■□□□□ 0.49
SCAP-213ENST00000494938 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
SCAP-213ENST00000494938 GGA1Q9UJY5 639 aa18.14■□□□□ 0.49
SCAP-213ENST00000494938 YDJCA8MPS7 323 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 398.4 ms