RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ZCWPW1Q9H0M4 648 aa4.7□□□□□ -1.66
ATG3-207ENST00000494571 CHCHD3Q9NX63 227 aaKnown RBP4.7□□□□□ -1.66
ATG3-207ENST00000494571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATG3-207ENST00000494571 CCDC171Q6TFL3 1326 aa4.7□□□□□ -1.66
ATG3-207ENST00000494571 PLA2R1Q13018 1463 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 ANKRD33BA6NCL7 494 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6CA6NDK9 693 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6BA6NDN3 693 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 C21orf2O43822 256 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 PPP1R12BO60237 982 aaPredicted RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 CPP00450 1065 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6DP0CG33 693 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 SETSIPP0DME0 302 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 PYGBP11216 843 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GPTP24298 496 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GBP2P32456 591 aaPredicted RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 CCT5P48643 541 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 EIF5P55010 431 aaKnown RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 EVCP57679 992 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 E2F5Q15329 346 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 ZRSR2Q15696 482 aaKnown RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 INF2Q27J81 1249 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 CC2D1AQ6P1N0 951 aaPredicted RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 CNNM3Q8NE01 707 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 NUP133Q8WUM0 1156 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 TMX3Q96JJ7 454 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 ZNF396Q96N95 335 aaPredicted RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 YIPF2Q9BWQ6 316 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 GOLGA6AQ9NYA3 693 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 LMCD1Q9NZU5 365 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 MKRN1Q9UHC7 482 aaKnown RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 MCM8Q9UJA3 840 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 NKTRP30414 1462 aaKnown RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 TMCO5BA8MYB1 307 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 PPFIA2O75334 1257 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 CCDC192P0DO97 292 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 INPP5BP32019 993 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 TIE1P35590 1138 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 THEMIS2Q5TEJ8 643 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 TSHZ1Q6ZSZ6 1077 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 LTBP4Q8N2S1 1624 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 ARHGEF1Q92888 912 aaKnown RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 ZKSCAN4Q969J2 545 aaPredicted RBP4.69□□□□□ -1.66
ATG3-207ENST00000494571 CLIC6Q96NY7 704 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 ACBD3Q9H3P7 528 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 AKAP2Q9Y2D5 859 aa4.69□□□□□ -1.66
ATG3-207ENST00000494571 RICTORQ6R327 1708 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 BLMP54132 1417 aaPredicted RBP4.68□□□□□ -1.66
ATG3-207ENST00000494571 ANKRD18BA2A2Z9 1011 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CCDC69A6NI79 296 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 EXOC5O00471 708 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 ERC2O15083 957 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 TPP2P29144 1249 aaPredicted RBP4.68□□□□□ -1.66
ATG3-207ENST00000494571 CDC25CP30307 473 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 GRIK3Q13003 919 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 KCNB1Q14721 858 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CRYMQ14894 314 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 HSP90B2PQ58FF3 399 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 FBXW7Q969H0 707 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CABS1Q96KC9 395 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 SCLT1Q96NL6 688 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 YIPF3Q9GZM5 350 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 USP16Q9Y5T5 823 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 NAIPQ13075 1403 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 NPATQ14207 1427 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 KANK1Q14678 1352 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CAVIN2O95810 425 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CA8P35219 290 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 ZNF75DP51815 510 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 NEK4P51957 841 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 EMP3P54852 163 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 CEBPZQ03701 1054 aaKnown RBP4.68□□□□□ -1.66
ATG3-207ENST00000494571 PSD3Q9NYI0 1048 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 TRAK1Q9UPV9 953 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 FAM169AQ9Y6X4 670 aa4.68□□□□□ -1.66
ATG3-207ENST00000494571 PTPRKQ15262 1439 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 RBM47A0AV96 593 aaKnown RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 EIF4E1BA6NMX2 242 aaKnown RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 SRGAP3O43295 1099 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 PPFIA4O75335 1185 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 PECAM1P16284 738 aaPredicted RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 SCNN1BP51168 640 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 RARSP54136 660 aaKnown RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 FAM69CQ0P6D2 419 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 LAMB3Q13751 1172 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 MVPQ14764 893 aaKnown RBP4.67□□□□□ -1.66
ATG3-207ENST00000494571 ANO6Q4KMQ2 910 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 NYAP1Q6ZVC0 841 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 ARMC9Q7Z3E5 817 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 LRRC8AQ8IWT6 810 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 FAM200AQ8TCP9 573 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 SAAL1Q96ER3 474 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 MTRQ99707 1265 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 SUGCTQ9HAC7 445 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 SAMM50Q9Y512 469 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 PTPRGP23470 1445 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 PARD3Q8TEW0 1356 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 EBAG9O00559 213 aa4.67□□□□□ -1.66
ATG3-207ENST00000494571 LGR5O75473 907 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms