RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 A0A087WZG4 1122 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 ATP5J2-PTCD1G3V325 749 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 RABEP1Q15276 862 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
ZIC4-216ENST00000494569 NHSQ6T4R5 1651 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 LY75O60449 1722 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 MYH14Q7Z406 1995 aaKnown RBP13.42□□□□□ -0.26
ZIC4-216ENST00000494569 GLRX3O76003 335 aaKnown RBP13.42□□□□□ -0.26
ZIC4-216ENST00000494569 UBE3BQ7Z3V4 1068 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
ZIC4-216ENST00000494569 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
ZIC4-216ENST00000494569 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
ZIC4-216ENST00000494569 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 RAB3GAP1Q15042 981 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 SGSM2O43147 1006 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
ZIC4-216ENST00000494569 COL4A1P02462 1669 aa13.4□□□□□ -0.26
ZIC4-216ENST00000494569 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
ZIC4-216ENST00000494569 ANAPC15P60006 121 aa13.4□□□□□ -0.26
ZIC4-216ENST00000494569 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
ZIC4-216ENST00000494569 K7ELQ4 463 aaPredicted RBP13.4□□□□□ -0.26
ZIC4-216ENST00000494569 PTGER2P43116 358 aa13.4□□□□□ -0.26
ZIC4-216ENST00000494569 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZIC4-216ENST00000494569 JARID2Q92833 1246 aaPredicted RBP13.39□□□□□ -0.27
ZIC4-216ENST00000494569 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
ZIC4-216ENST00000494569 RFX7Q2KHR2 1363 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 IGSF3O75054 1194 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 DDB1Q16531 1140 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 GPR108Q9NPR9 543 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
ZIC4-216ENST00000494569 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 ZNF609O15014 1411 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 STARD3NLO95772 234 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 CSF1RP07333 972 aa13.39□□□□□ -0.27
ZIC4-216ENST00000494569 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
ZIC4-216ENST00000494569 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
ZIC4-216ENST00000494569 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
ZIC4-216ENST00000494569 AACSQ86V21 672 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 CIAO1O76071 339 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 HSPA4P34932 840 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
ZIC4-216ENST00000494569 ZNF784Q8NCA9 323 aaPredicted RBP13.38□□□□□ -0.27
ZIC4-216ENST00000494569 RAD50Q92878 1312 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 PALD1Q9ULE6 856 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
ZIC4-216ENST00000494569 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 IL6STP40189 918 aaPredicted RBP13.37□□□□□ -0.27
ZIC4-216ENST00000494569 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 CHMP5Q9NZZ3 219 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 ATP5JP18859 108 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 PROM2Q8N271 834 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
ZIC4-216ENST00000494569 BTAF1O14981 1849 aa13.37□□□□□ -0.27
ZIC4-216ENST00000494569 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 TFCP2Q12800 502 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 OS9Q13438 667 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 ZBTB1Q9Y2K1 713 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 CUL4AQ13619 759 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 HLFQ16534 295 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
ZIC4-216ENST00000494569 GPATCH3Q96I76 525 aa13.36□□□□□ -0.27
ZIC4-216ENST00000494569 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 MTFR1LQ9H019 292 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 SIL1Q9H173 461 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 RIC1Q4ADV7 1423 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 TTC14Q96N46 770 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
ZIC4-216ENST00000494569 ZDHHC9Q9Y397 364 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 C4AP0C0L4 1744 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
ZIC4-216ENST00000494569 SLC15A2Q16348 729 aa13.34□□□□□ -0.27
ZIC4-216ENST00000494569 KIF6Q6ZMV9 814 aa13.34□□□□□ -0.27
ZIC4-216ENST00000494569 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
ZIC4-216ENST00000494569 RPAP1Q9BWH6 1393 aaPredicted RBP13.33□□□□□ -0.27
ZIC4-216ENST00000494569 ITPK1Q13572 414 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 SYT17Q9BSW7 474 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms