RNA–Protein interactions for RNA: ENST00000494535.1

SCARF2-201, Transcript of scavenger receptor class F member 2, humanhuman

TSL 2

Gene SCARF2, Length 780 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF2-201ENST00000494535 LAMB2P55268 1798 aa26.56■■□□□ 1.84
SCARF2-201ENST00000494535 CENPBP07199 599 aaPredicted RBP26.55■■□□□ 1.84
SCARF2-201ENST00000494535 NLRP3Q96P20 1036 aa26.55■■□□□ 1.84
SCARF2-201ENST00000494535 METTL22Q9BUU2 404 aaPredicted RBP26.55■■□□□ 1.84
SCARF2-201ENST00000494535 SCN4AP35499 1836 aa26.55■■□□□ 1.84
SCARF2-201ENST00000494535 NLRP10Q86W26 655 aa26.54■■□□□ 1.84
SCARF2-201ENST00000494535 MYD88Q99836 296 aa26.54■■□□□ 1.84
SCARF2-201ENST00000494535 MS4A1P11836 297 aa26.53■■□□□ 1.84
SCARF2-201ENST00000494535 SLC4A10Q6U841 1118 aa26.53■■□□□ 1.84
SCARF2-201ENST00000494535 F6X3S4 739 aa26.52■■□□□ 1.84
SCARF2-201ENST00000494535 OLFM4Q6UX06 510 aa26.52■■□□□ 1.84
SCARF2-201ENST00000494535 ATF7IPQ6VMQ6 1270 aa26.52■■□□□ 1.84
SCARF2-201ENST00000494535 L3MBTL3Q96JM7 780 aaPredicted RBP26.52■■□□□ 1.84
SCARF2-201ENST00000494535 DNAJC5GQ8N7S2 189 aa26.51■■□□□ 1.83
SCARF2-201ENST00000494535 ZNF277Q9NRM2 450 aaPredicted RBP26.51■■□□□ 1.83
SCARF2-201ENST00000494535 IARSP41252 1262 aaKnown RBP26.5■■□□□ 1.83
SCARF2-201ENST00000494535 C3orf67Q6ZVT6 689 aa26.5■■□□□ 1.83
SCARF2-201ENST00000494535 FTSJ3Q8IY81 847 aaKnown RBP26.5■■□□□ 1.83
SCARF2-201ENST00000494535 SYNE4Q8N205 404 aa26.5■■□□□ 1.83
SCARF2-201ENST00000494535 SH3TC1Q8TE82 1336 aa26.49■■□□□ 1.83
SCARF2-201ENST00000494535 DDNO94850 711 aaPredicted RBP26.49■■□□□ 1.83
SCARF2-201ENST00000494535 IQCA1LA6NCM1 817 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 ATP5J2-PTCD1G3V325 749 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 FZD9O00144 591 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 PPEF1O14829 653 aaPredicted RBP26.48■■□□□ 1.83
SCARF2-201ENST00000494535 CCDC191Q8NCU4 936 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 LINS1Q8NG48 757 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 ISCA1Q9BUE6 129 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 SRCIN1Q9C0H9 1055 aa26.48■■□□□ 1.83
SCARF2-201ENST00000494535 DDX60Q8IY21 1712 aaKnown RBP26.48■■□□□ 1.83
SCARF2-201ENST00000494535 TRIM27P14373 513 aa26.47■■□□□ 1.83
SCARF2-201ENST00000494535 CCT4P50991 539 aaKnown RBP26.47■■□□□ 1.83
SCARF2-201ENST00000494535 TRIM28Q13263 835 aaKnown RBP26.47■■□□□ 1.83
SCARF2-201ENST00000494535 CWC25Q9NXE8 425 aaPredicted RBP26.47■■□□□ 1.83
SCARF2-201ENST00000494535 TRMT112Q9UI30 125 aaKnown RBP26.47■■□□□ 1.83
SCARF2-201ENST00000494535 ALDH1L1O75891 902 aa26.45■■□□□ 1.82
SCARF2-201ENST00000494535 DZIP1LQ8IYY4 767 aaKnown RBP26.45■■□□□ 1.82
SCARF2-201ENST00000494535 CLUAP1Q96AJ1 413 aa26.45■■□□□ 1.82
SCARF2-201ENST00000494535 VPS33BQ9H267 617 aa26.45■■□□□ 1.82
SCARF2-201ENST00000494535 ATP6V0A2Q9Y487 856 aa26.45■■□□□ 1.82
SCARF2-201ENST00000494535 ABCC4O15439 1325 aa26.44■■□□□ 1.82
SCARF2-201ENST00000494535 BBOX1O75936 387 aa26.44■■□□□ 1.82
SCARF2-201ENST00000494535 BEND3Q5T5X7 828 aa26.44■■□□□ 1.82
SCARF2-201ENST00000494535 JDP2Q8WYK2 163 aa26.44■■□□□ 1.82
SCARF2-201ENST00000494535 TMX4Q9H1E5 349 aaPredicted RBP26.44■■□□□ 1.82
SCARF2-201ENST00000494535 ZNF541Q9H0D2 1346 aa26.43■■□□□ 1.82
SCARF2-201ENST00000494535 NEURL1BA8MQ27 555 aa26.43■■□□□ 1.82
SCARF2-201ENST00000494535 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
SCARF2-201ENST00000494535 IGKV5-2P06315 115 aa26.42■■□□□ 1.82
SCARF2-201ENST00000494535 GPC2Q8N158 579 aa26.42■■□□□ 1.82
SCARF2-201ENST00000494535 COL4A5P29400 1685 aa26.41■■□□□ 1.82
SCARF2-201ENST00000494535 HCLS1P14317 486 aaPredicted RBP26.41■■□□□ 1.82
SCARF2-201ENST00000494535 HSP90B1P14625 803 aaKnown RBP26.41■■□□□ 1.82
SCARF2-201ENST00000494535 RRP1P56182 461 aaKnown RBP26.41■■□□□ 1.82
SCARF2-201ENST00000494535 CHADLQ6NUI6 762 aa26.41■■□□□ 1.82
SCARF2-201ENST00000494535 LRRC37AA6NMS7 1700 aa26.4■■□□□ 1.82
SCARF2-201ENST00000494535 PLIN1O60240 522 aa26.4■■□□□ 1.82
SCARF2-201ENST00000494535 DDX46Q7L014 1031 aaKnown RBP26.4■■□□□ 1.82
SCARF2-201ENST00000494535 TMC4Q7Z404 712 aa26.4■■□□□ 1.82
SCARF2-201ENST00000494535 SP8Q8IXZ3 490 aa26.4■■□□□ 1.82
SCARF2-201ENST00000494535 RTFDC1Q9BY42 306 aaPredicted RBP26.4■■□□□ 1.82
SCARF2-201ENST00000494535 TAF1DQ9H5J8 278 aaPredicted RBP26.4■■□□□ 1.82
SCARF2-201ENST00000494535 C9orf78Q9NZ63 289 aaPredicted RBP26.4■■□□□ 1.82
SCARF2-201ENST00000494535 ADAMTSL1Q8N6G6 1762 aa26.4■■□□□ 1.82
SCARF2-201ENST00000494535 GRAPQ13588 217 aa26.39■■□□□ 1.82
SCARF2-201ENST00000494535 GCKRQ14397 625 aa26.39■■□□□ 1.82
SCARF2-201ENST00000494535 SUPT20HQ8NEM7 779 aa26.39■■□□□ 1.82
SCARF2-201ENST00000494535 GRAPLQ8TC17 118 aaPredicted RBP26.39■■□□□ 1.82
SCARF2-201ENST00000494535 KLRG1Q96E93 195 aa26.39■■□□□ 1.82
SCARF2-201ENST00000494535 PDE3AQ14432 1141 aa26.38■■□□□ 1.81
SCARF2-201ENST00000494535 INTS3Q68E01 1043 aaKnown RBP26.38■■□□□ 1.81
SCARF2-201ENST00000494535 LDHDQ86WU2 507 aa26.38■■□□□ 1.81
SCARF2-201ENST00000494535 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
SCARF2-201ENST00000494535 HACL1Q9UJ83 578 aa26.38■■□□□ 1.81
SCARF2-201ENST00000494535 TAF1P21675 1872 aa26.37■■□□□ 1.81
SCARF2-201ENST00000494535 PCCAP05165 728 aaPredicted RBP26.37■■□□□ 1.81
SCARF2-201ENST00000494535 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
SCARF2-201ENST00000494535 LARGE2Q8N3Y3 721 aa26.37■■□□□ 1.81
SCARF2-201ENST00000494535 JMYQ8N9B5 988 aa26.37■■□□□ 1.81
SCARF2-201ENST00000494535 SUPT16HQ9Y5B9 1047 aaKnown RBP26.37■■□□□ 1.81
SCARF2-201ENST00000494535 EIF6P56537 245 aaKnown RBP26.36■■□□□ 1.81
SCARF2-201ENST00000494535 ITPRIPQ8IWB1 547 aa26.36■■□□□ 1.81
SCARF2-201ENST00000494535 TNNQ9UQP3 1299 aa26.36■■□□□ 1.81
SCARF2-201ENST00000494535 HTRA3P83110 453 aa26.35■■□□□ 1.81
SCARF2-201ENST00000494535 PNMA8AQ86V59 439 aaPredicted RBP26.35■■□□□ 1.81
SCARF2-201ENST00000494535 TMEM57Q8N5G2 664 aa26.35■■□□□ 1.81
SCARF2-201ENST00000494535 FAM89AQ96GI7 184 aa26.35■■□□□ 1.81
SCARF2-201ENST00000494535 HDAC5Q9UQL6 1122 aa26.35■■□□□ 1.81
SCARF2-201ENST00000494535 GRM8O00222 908 aa26.34■■□□□ 1.81
SCARF2-201ENST00000494535 RTL5Q5HYW3 569 aaPredicted RBP26.34■■□□□ 1.81
SCARF2-201ENST00000494535 UBE3BQ7Z3V4 1068 aa26.34■■□□□ 1.81
SCARF2-201ENST00000494535 PANK1Q8TE04 598 aa26.34■■□□□ 1.81
SCARF2-201ENST00000494535 CHMP4BQ9H444 224 aaKnown RBP26.34■■□□□ 1.81
SCARF2-201ENST00000494535 POTEIP0CG38 1075 aa26.33■■□□□ 1.81
SCARF2-201ENST00000494535 POTEJP0CG39 1038 aa26.33■■□□□ 1.81
SCARF2-201ENST00000494535 EPHX2P34913 555 aa26.33■■□□□ 1.81
SCARF2-201ENST00000494535 DPP8Q6V1X1 898 aaPredicted RBP26.33■■□□□ 1.81
SCARF2-201ENST00000494535 SLC51AQ86UW1 340 aa26.33■■□□□ 1.81
SCARF2-201ENST00000494535 NIM1KQ8IY84 436 aa26.33■■□□□ 1.81
SCARF2-201ENST00000494535 H7C1W4 665 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms