RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF609O15014 1411 aa20.07■□□□□ 0.8
ATG4B-225ENST00000494465 TTLL11Q8NHH1 800 aa20.07■□□□□ 0.8
ATG4B-225ENST00000494465 GJD4Q96KN9 370 aaPredicted RBP20.07■□□□□ 0.8
ATG4B-225ENST00000494465 DIAPH3Q9NSV4 1193 aa20.07■□□□□ 0.8
ATG4B-225ENST00000494465 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
ATG4B-225ENST00000494465 RAD50Q92878 1312 aa20.06■□□□□ 0.8
ATG4B-225ENST00000494465 ANAPC15P60006 121 aa20.06■□□□□ 0.8
ATG4B-225ENST00000494465 LINC00116Q8NCU8 138 aa20.06■□□□□ 0.8
ATG4B-225ENST00000494465 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-225ENST00000494465 FBXO3Q9UK99 471 aa20.06■□□□□ 0.8
ATG4B-225ENST00000494465 AFF2P51816 1311 aa20.06■□□□□ 0.8
ATG4B-225ENST00000494465 IRS4O14654 1257 aaPredicted RBP20.06■□□□□ 0.8
ATG4B-225ENST00000494465 MEX3CQ5U5Q3 659 aaKnown RBP20.06■□□□□ 0.8
ATG4B-225ENST00000494465 SBF2Q86WG5 1849 aa20.05■□□□□ 0.8
ATG4B-225ENST00000494465 HSPA4P34932 840 aa20.05■□□□□ 0.8
ATG4B-225ENST00000494465 CTSWP56202 376 aa20.05■□□□□ 0.8
ATG4B-225ENST00000494465 ATRNO75882 1429 aa20.05■□□□□ 0.8
ATG4B-225ENST00000494465 MCCP23508 829 aa20.05■□□□□ 0.8
ATG4B-225ENST00000494465 TIMM10P62072 90 aa20.04■□□□□ 0.8
ATG4B-225ENST00000494465 IFIT5Q13325 482 aaKnown RBP20.04■□□□□ 0.8
ATG4B-225ENST00000494465 RUFY2Q8WXA3 655 aa20.04■□□□□ 0.8
ATG4B-225ENST00000494465 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
ATG4B-225ENST00000494465 GREM2Q9H772 168 aa20.04■□□□□ 0.8
ATG4B-225ENST00000494465 FAM182BQ5T319 152 aa20.03■□□□□ 0.8
ATG4B-225ENST00000494465 SUSD4Q5VX71 490 aa20.03■□□□□ 0.8
ATG4B-225ENST00000494465 DDX60Q8IY21 1712 aaKnown RBP20.03■□□□□ 0.8
ATG4B-225ENST00000494465 ONECUT3O60422 494 aaPredicted RBP20.03■□□□□ 0.8
ATG4B-225ENST00000494465 KCNQ4P56696 695 aa20.03■□□□□ 0.8
ATG4B-225ENST00000494465 HAUS7Q99871 368 aa20.03■□□□□ 0.8
ATG4B-225ENST00000494465 SNRKQ9NRH2 765 aa20.03■□□□□ 0.8
ATG4B-225ENST00000494465 PDE8AO60658 829 aa20.02■□□□□ 0.8
ATG4B-225ENST00000494465 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
ATG4B-225ENST00000494465 HIP1O00291 1037 aa20.02■□□□□ 0.8
ATG4B-225ENST00000494465 ITGA6P23229 1130 aa20.02■□□□□ 0.8
ATG4B-225ENST00000494465 NMIQ13287 307 aaPredicted RBP20.02■□□□□ 0.8
ATG4B-225ENST00000494465 FSD1Q9BTV5 496 aa20.02■□□□□ 0.8
ATG4B-225ENST00000494465 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.79
ATG4B-225ENST00000494465 A0A1B0GUL7 405 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 FRAT2O75474 233 aaPredicted RBP20.01■□□□□ 0.79
ATG4B-225ENST00000494465 NEUROD6Q96NK8 337 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 CHMP5Q9NZZ3 219 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 NDUFB9Q9Y6M9 179 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 LY75O60449 1722 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 LAMB2P55268 1798 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 ST18O60284 1047 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 PTH1RQ03431 593 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 CEP126Q9P2H0 1117 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 RIPOR2Q9Y4F9 1068 aa20.01■□□□□ 0.79
ATG4B-225ENST00000494465 LRP5O75197 1615 aa20■□□□□ 0.79
ATG4B-225ENST00000494465 A0A0D9SFI3 127 aa20■□□□□ 0.79
ATG4B-225ENST00000494465 KIAA1211Q6ZU35 1233 aa20■□□□□ 0.79
ATG4B-225ENST00000494465 AK7Q96M32 723 aa20■□□□□ 0.79
ATG4B-225ENST00000494465 SH3TC1Q8TE82 1336 aa20■□□□□ 0.79
ATG4B-225ENST00000494465 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 TAF7LQ5H9L4 462 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 MED23Q9ULK4 1368 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 ANKRD18BA2A2Z9 1011 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 NEK4P51957 841 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 SCN7AQ01118 1682 aa19.99■□□□□ 0.79
ATG4B-225ENST00000494465 UTP14AQ9BVJ6 771 aaKnown RBP19.99■□□□□ 0.79
ATG4B-225ENST00000494465 TRPC5Q9UL62 973 aaPredicted RBP19.99■□□□□ 0.79
ATG4B-225ENST00000494465 NTSR2O95665 410 aa19.98■□□□□ 0.79
ATG4B-225ENST00000494465 SNX14Q9Y5W7 946 aa19.98■□□□□ 0.79
ATG4B-225ENST00000494465 RASEFQ8IZ41 740 aa19.98■□□□□ 0.79
ATG4B-225ENST00000494465 DNAJC2Q99543 621 aaKnown RBP19.98■□□□□ 0.79
ATG4B-225ENST00000494465 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
ATG4B-225ENST00000494465 SPEF2Q9C093 1822 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 CCDC171Q6TFL3 1326 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
ATG4B-225ENST00000494465 FOXD4L1Q9NU39 408 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 RC3H1Q5TC82 1133 aaKnown RBP19.97■□□□□ 0.79
ATG4B-225ENST00000494465 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 LDHAL6AQ6ZMR3 332 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 AKAP2Q9Y2D5 859 aa19.97■□□□□ 0.79
ATG4B-225ENST00000494465 FAM177BA6PVY3 158 aa19.96■□□□□ 0.79
ATG4B-225ENST00000494465 ADORA1P30542 326 aa19.96■□□□□ 0.79
ATG4B-225ENST00000494465 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
ATG4B-225ENST00000494465 VGLL2Q8N8G2 317 aa19.96■□□□□ 0.79
ATG4B-225ENST00000494465 KCNB2Q92953 911 aa19.96■□□□□ 0.79
ATG4B-225ENST00000494465 CIZ1Q9ULV3 898 aaPredicted RBP19.96■□□□□ 0.79
ATG4B-225ENST00000494465 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
ATG4B-225ENST00000494465 KBTBD3Q8NAB2 608 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 XAGE2Q96GT9 111 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 CHGBP05060 677 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
ATG4B-225ENST00000494465 NECTIN1Q15223 517 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 SMIM5Q71RC9 77 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-225ENST00000494465 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.95■□□□□ 0.78
ATG4B-225ENST00000494465 MAP4K1Q92918 833 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 ZNF652Q9Y2D9 606 aa19.95■□□□□ 0.78
ATG4B-225ENST00000494465 UPF3BQ9BZI7 483 aaKnown RBP19.94■□□□□ 0.78
ATG4B-225ENST00000494465 PAG1Q9NWQ8 432 aa19.94■□□□□ 0.78
ATG4B-225ENST00000494465 CASZ1Q86V15 1759 aa19.94■□□□□ 0.78
ATG4B-225ENST00000494465 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
ATG4B-225ENST00000494465 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
ATG4B-225ENST00000494465 CNNM1Q9NRU3 951 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms