RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PLA2G12BQ9BX93 195 aa15.73■□□□□ 0.11
TRA2A-209ENST00000494255 ABCC4O15439 1325 aa15.73■□□□□ 0.11
TRA2A-209ENST00000494255 CLUAP1Q96AJ1 413 aa15.73■□□□□ 0.11
TRA2A-209ENST00000494255 GRAPQ13588 217 aa15.72■□□□□ 0.11
TRA2A-209ENST00000494255 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
TRA2A-209ENST00000494255 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
TRA2A-209ENST00000494255 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
TRA2A-209ENST00000494255 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
TRA2A-209ENST00000494255 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
TRA2A-209ENST00000494255 UTYO14607 1347 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 BBOX1O75936 387 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 CCDC93Q567U6 631 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 TTLL11Q8NHH1 800 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 CCDC85AQ96PX6 553 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-209ENST00000494255 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-209ENST00000494255 MS4A1P11836 297 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 TMC4Q7Z404 712 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 DZIP1LQ8IYY4 767 aaKnown RBP15.7■□□□□ 0.1
TRA2A-209ENST00000494255 C7orf43Q8WVR3 580 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 USP44Q9H0E7 712 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
TRA2A-209ENST00000494255 CHD4Q14839 1912 aa15.69■□□□□ 0.1
TRA2A-209ENST00000494255 TAF1P21675 1872 aa15.69■□□□□ 0.1
TRA2A-209ENST00000494255 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
TRA2A-209ENST00000494255 CDC5LQ99459 802 aaKnown RBP15.69■□□□□ 0.1
TRA2A-209ENST00000494255 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
TRA2A-209ENST00000494255 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
TRA2A-209ENST00000494255 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
TRA2A-209ENST00000494255 FOXO4P98177 505 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 RTKN2Q8IZC4 609 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 SUCLG2Q96I99 432 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 GREM2Q9H772 168 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 SEC31BQ9NQW1 1179 aa15.68■□□□□ 0.1
TRA2A-209ENST00000494255 CSF1RP07333 972 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 ANKRD18AQ8IVF6 992 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 TMEM57Q8N5G2 664 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 CELF1Q92879 486 aaKnown RBP15.67■□□□□ 0.1
TRA2A-209ENST00000494255 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 GNAI3P08754 354 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 ITGA6P23229 1130 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 FAM161AQ3B820 660 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 SP8Q8IXZ3 490 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
TRA2A-209ENST00000494255 ANKRD18BA2A2Z9 1011 aa15.66■□□□□ 0.1
TRA2A-209ENST00000494255 RASSF7Q02833 373 aa15.66■□□□□ 0.1
TRA2A-209ENST00000494255 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
TRA2A-209ENST00000494255 EPHA10Q5JZY3 1008 aa15.66■□□□□ 0.1
TRA2A-209ENST00000494255 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
TRA2A-209ENST00000494255 LTBP3Q9NS15 1303 aa15.65■□□□□ 0.1
TRA2A-209ENST00000494255 NFKBIEO00221 500 aa15.65■□□□□ 0.1
TRA2A-209ENST00000494255 IGHMBP2P38935 993 aaKnown RBP15.65■□□□□ 0.1
TRA2A-209ENST00000494255 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
TRA2A-209ENST00000494255 MEIS3Q99687 375 aa15.65■□□□□ 0.1
TRA2A-209ENST00000494255 BICC1Q9H694 974 aaKnown RBP15.65■□□□□ 0.1
TRA2A-209ENST00000494255 PLIN1O60240 522 aa15.64■□□□□ 0.09
TRA2A-209ENST00000494255 RLBP1P12271 317 aa15.64■□□□□ 0.09
TRA2A-209ENST00000494255 FKBP4Q02790 459 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRA2A-209ENST00000494255 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
TRA2A-209ENST00000494255 LMNB1P20700 586 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 KAZALD1Q96I82 304 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 SPEF2Q9C093 1822 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 LRRC37AA6NMS7 1700 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 RABL6Q3YEC7 729 aaPredicted RBP15.63■□□□□ 0.09
TRA2A-209ENST00000494255 C9orf131Q5VYM1 1079 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
TRA2A-209ENST00000494255 MPNDQ8N594 471 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 PSMD1Q99460 953 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 MPHOSPH8Q99549 860 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 COL4A1P02462 1669 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 SBF1O95248 1867 aa15.63■□□□□ 0.09
TRA2A-209ENST00000494255 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
TRA2A-209ENST00000494255 SUPT20HQ8NEM7 779 aa15.62■□□□□ 0.09
TRA2A-209ENST00000494255 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
TRA2A-209ENST00000494255 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
TRA2A-209ENST00000494255 YY1P25490 414 aa15.61■□□□□ 0.09
TRA2A-209ENST00000494255 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
TRA2A-209ENST00000494255 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
TRA2A-209ENST00000494255 GNAI2P04899 355 aa15.6■□□□□ 0.09
TRA2A-209ENST00000494255 PDE3AQ14432 1141 aa15.6■□□□□ 0.09
TRA2A-209ENST00000494255 ZNF277Q9NRM2 450 aaPredicted RBP15.6■□□□□ 0.09
TRA2A-209ENST00000494255 ANKIB1Q9P2G1 1089 aa15.6■□□□□ 0.09
TRA2A-209ENST00000494255 NSFL1CQ9UNZ2 370 aaKnown RBP15.6■□□□□ 0.09
TRA2A-209ENST00000494255 IARSP41252 1262 aaKnown RBP15.59■□□□□ 0.09
TRA2A-209ENST00000494255 GPSM2P81274 684 aa15.59■□□□□ 0.09
TRA2A-209ENST00000494255 MVPQ14764 893 aaKnown RBP15.59■□□□□ 0.09
TRA2A-209ENST00000494255 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
TRA2A-209ENST00000494255 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
TRA2A-209ENST00000494255 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
TRA2A-209ENST00000494255 XDHP47989 1333 aa15.59■□□□□ 0.09
TRA2A-209ENST00000494255 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms