RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 RPAP2Q8IXW5 612 aaPredicted RBP11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 KAZALD1Q96I82 304 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
RN7SL538P-201ENST00000494227 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 ISCA1Q9BUE6 129 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 UTYO14607 1347 aa11.24□□□□□ -0.61
RN7SL538P-201ENST00000494227 GRM8O00222 908 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 HSPA1AP0DMV8 641 aaKnown RBP11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 HSPA1BP0DMV9 641 aaKnown RBP11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 CASP7P55210 303 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 NEXNQ0ZGT2 675 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 FSTL1Q12841 308 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 EPHA10Q5JZY3 1008 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
RN7SL538P-201ENST00000494227 H7C1W4 665 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 RPS6KA4O75676 772 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 PDE4AP27815 886 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 RFC4P35249 363 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 PPP1R42Q7Z4L9 355 aa11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 DICER1Q9UPY3 1922 aaKnown RBP11.22□□□□□ -0.61
RN7SL538P-201ENST00000494227 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 IBTKQ9P2D0 1353 aaPredicted RBP11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 A0A087WZG4 1122 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 CAMTA2O94983 1202 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 RGS3P49796 1198 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 NUCB1Q02818 461 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 TRIM28Q13263 835 aaKnown RBP11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
RN7SL538P-201ENST00000494227 LAMB4A4D0S4 1761 aa11.21□□□□□ -0.62
RN7SL538P-201ENST00000494227 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 GPTP24298 496 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 ZNF34Q8IZ26 560 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 SYNE4Q8N205 404 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 SSH3Q8TE77 659 aa11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 BICC1Q9H694 974 aaKnown RBP11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 CWC25Q9NXE8 425 aaPredicted RBP11.2□□□□□ -0.62
RN7SL538P-201ENST00000494227 ARFGEF2Q9Y6D5 1785 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 NFKBIEO00221 500 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 MTX1Q13505 466 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 NLRP10Q86W26 655 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 GCC1Q96CN9 775 aa11.19□□□□□ -0.62
RN7SL538P-201ENST00000494227 COL15A1P39059 1388 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 POTECB2RU33 542 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 SMARCA5O60264 1052 aaPredicted RBP11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 POTEIP0CG38 1075 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 FOXO4P98177 505 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 EXOC6BQ9Y2D4 811 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 BCORQ6W2J9 1755 aa11.18□□□□□ -0.62
RN7SL538P-201ENST00000494227 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 APBB1O00213 710 aa11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 HMMRO75330 724 aa11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 FAM89AQ96GI7 184 aa11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 PA2G4Q9UQ80 394 aaKnown RBP11.17□□□□□ -0.62
RN7SL538P-201ENST00000494227 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 CACNA1FO60840 1977 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 TM4SF1P30408 202 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 RFX5P48382 616 aaPredicted RBP11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 NFIXQ14938 502 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 RABL6Q3YEC7 729 aaPredicted RBP11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 SUSD4Q5VX71 490 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 OTUD7AQ8TE49 926 aaPredicted RBP11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 ADAMTSL1Q8N6G6 1762 aa11.16□□□□□ -0.62
RN7SL538P-201ENST00000494227 SURF6O75683 361 aaKnown RBP11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 LMBR1LQ6UX01 489 aa11.15□□□□□ -0.62
RN7SL538P-201ENST00000494227 KLHDC4Q8TBB5 520 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms