RNA–Protein interactions for RNA: ENST00000494146.5

PTK7-219, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 4

Gene PTK7, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-219ENST00000494146 HOXA10P31260 410 aaPredicted RBP12.55□□□□□ -0.4
PTK7-219ENST00000494146 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
PTK7-219ENST00000494146 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
PTK7-219ENST00000494146 ANKRD36CQ5JPF3 1778 aa12.54□□□□□ -0.4
PTK7-219ENST00000494146 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
PTK7-219ENST00000494146 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
PTK7-219ENST00000494146 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
PTK7-219ENST00000494146 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
PTK7-219ENST00000494146 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
PTK7-219ENST00000494146 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
PTK7-219ENST00000494146 ZKSCAN2Q63HK3 967 aa12.53□□□□□ -0.4
PTK7-219ENST00000494146 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
PTK7-219ENST00000494146 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
PTK7-219ENST00000494146 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
PTK7-219ENST00000494146 UBE3BQ7Z3V4 1068 aa12.53□□□□□ -0.4
PTK7-219ENST00000494146 GRM8O00222 908 aa12.52□□□□□ -0.41
PTK7-219ENST00000494146 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
PTK7-219ENST00000494146 C20orf194Q5TEA3 1177 aa12.52□□□□□ -0.41
PTK7-219ENST00000494146 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
PTK7-219ENST00000494146 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
PTK7-219ENST00000494146 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
PTK7-219ENST00000494146 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
PTK7-219ENST00000494146 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 C21orf2O43822 256 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 BBOX1O75936 387 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 CASP7P55210 303 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 PLA2G12BQ9BX93 195 aa12.51□□□□□ -0.41
PTK7-219ENST00000494146 GPBP1L1Q9HC44 474 aaPredicted RBP12.51□□□□□ -0.41
PTK7-219ENST00000494146 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
PTK7-219ENST00000494146 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
PTK7-219ENST00000494146 TRIM27P14373 513 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 CTSWP56202 376 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 GRAPQ13588 217 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 INTS3Q68E01 1043 aaKnown RBP12.5□□□□□ -0.41
PTK7-219ENST00000494146 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 GRAPLQ8TC17 118 aaPredicted RBP12.5□□□□□ -0.41
PTK7-219ENST00000494146 CLUAP1Q96AJ1 413 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
PTK7-219ENST00000494146 UTYO14607 1347 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 ABCC4O15439 1325 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
PTK7-219ENST00000494146 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 C7orf43Q8WVR3 580 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
PTK7-219ENST00000494146 CSF1RP07333 972 aa12.48□□□□□ -0.41
PTK7-219ENST00000494146 NBPF7P0C2Y1 421 aaPredicted RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
PTK7-219ENST00000494146 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
PTK7-219ENST00000494146 FOXO4P98177 505 aa12.47□□□□□ -0.41
PTK7-219ENST00000494146 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
PTK7-219ENST00000494146 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
PTK7-219ENST00000494146 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
PTK7-219ENST00000494146 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
PTK7-219ENST00000494146 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
PTK7-219ENST00000494146 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
PTK7-219ENST00000494146 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
PTK7-219ENST00000494146 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
PTK7-219ENST00000494146 GNAI3P08754 354 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.41
PTK7-219ENST00000494146 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 GREM2Q9H772 168 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
PTK7-219ENST00000494146 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
PTK7-219ENST00000494146 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 ITGA6P23229 1130 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 IGHMBP2P38935 993 aaKnown RBP12.45□□□□□ -0.42
PTK7-219ENST00000494146 IFIT5Q13325 482 aaKnown RBP12.45□□□□□ -0.42
PTK7-219ENST00000494146 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
PTK7-219ENST00000494146 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
PTK7-219ENST00000494146 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 NFKBIEO00221 500 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTK7-219ENST00000494146 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 MPNDQ8N594 471 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 KAZALD1Q96I82 304 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 PSMD1Q99460 953 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
PTK7-219ENST00000494146 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
PTK7-219ENST00000494146 DDX60Q8IY21 1712 aaKnown RBP12.44□□□□□ -0.42
PTK7-219ENST00000494146 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
PTK7-219ENST00000494146 LMNB1P20700 586 aa12.43□□□□□ -0.42
PTK7-219ENST00000494146 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
PTK7-219ENST00000494146 RASSF7Q02833 373 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms