RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 ARHGAP27Q6ZUM4 889 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 FRAT1Q92837 279 aaPredicted RBP12.62□□□□□ -0.39
MACF1-222ENST00000494012 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
MACF1-222ENST00000494012 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 ABCC4O15439 1325 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 CCDC88AQ3V6T2 1871 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
MACF1-222ENST00000494012 BBOX1O75936 387 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 GRAPQ13588 217 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 TMC4Q7Z404 712 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
MACF1-222ENST00000494012 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
MACF1-222ENST00000494012 PLA2G12BQ9BX93 195 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 TIAM2Q8IVF5 1701 aa12.61□□□□□ -0.39
MACF1-222ENST00000494012 CASP7P55210 303 aa12.6□□□□□ -0.39
MACF1-222ENST00000494012 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
MACF1-222ENST00000494012 C7orf43Q8WVR3 580 aa12.6□□□□□ -0.39
MACF1-222ENST00000494012 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
MACF1-222ENST00000494012 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
MACF1-222ENST00000494012 UTYO14607 1347 aa12.6□□□□□ -0.39
MACF1-222ENST00000494012 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
MACF1-222ENST00000494012 TRIM27P14373 513 aa12.59□□□□□ -0.39
MACF1-222ENST00000494012 C1QTNF8P60827 252 aa12.59□□□□□ -0.39
MACF1-222ENST00000494012 CDC5LQ99459 802 aaKnown RBP12.59□□□□□ -0.39
MACF1-222ENST00000494012 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
MACF1-222ENST00000494012 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
MACF1-222ENST00000494012 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
MACF1-222ENST00000494012 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
MACF1-222ENST00000494012 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
MACF1-222ENST00000494012 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
MACF1-222ENST00000494012 HDAC5Q9UQL6 1122 aa12.58□□□□□ -0.4
MACF1-222ENST00000494012 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
MACF1-222ENST00000494012 NFKBIEO00221 500 aa12.57□□□□□ -0.4
MACF1-222ENST00000494012 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
MACF1-222ENST00000494012 RPS8P62241 208 aaKnown RBP12.57□□□□□ -0.4
MACF1-222ENST00000494012 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
MACF1-222ENST00000494012 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
MACF1-222ENST00000494012 COL4A1P02462 1669 aa12.57□□□□□ -0.4
MACF1-222ENST00000494012 LTBP1Q14766 1721 aa12.57□□□□□ -0.4
MACF1-222ENST00000494012 CSF1RP07333 972 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
MACF1-222ENST00000494012 MS4A1P11836 297 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 LMNB1P20700 586 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 FOXO4P98177 505 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
MACF1-222ENST00000494012 RASSF7Q02833 373 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 ANKRD18AQ8IVF6 992 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
MACF1-222ENST00000494012 CCDC85AQ96PX6 553 aaPredicted RBP12.56□□□□□ -0.4
MACF1-222ENST00000494012 PSMD1Q99460 953 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 USP44Q9H0E7 712 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 GREM2Q9H772 168 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
MACF1-222ENST00000494012 ANKRD18BA2A2Z9 1011 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 ITGA6P23229 1130 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
MACF1-222ENST00000494012 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
MACF1-222ENST00000494012 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.55□□□□□ -0.4
MACF1-222ENST00000494012 CLUAP1Q96AJ1 413 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
MACF1-222ENST00000494012 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
MACF1-222ENST00000494012 A0A1B0GUL6 1792 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 GNAI3P08754 354 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
MACF1-222ENST00000494012 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
MACF1-222ENST00000494012 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 DUOX1Q9NRD9 1551 aa12.54□□□□□ -0.4
MACF1-222ENST00000494012 RABL6Q3YEC7 729 aaPredicted RBP12.53□□□□□ -0.4
MACF1-222ENST00000494012 MPNDQ8N594 471 aa12.53□□□□□ -0.4
MACF1-222ENST00000494012 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
MACF1-222ENST00000494012 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
MACF1-222ENST00000494012 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
MACF1-222ENST00000494012 IARSP41252 1262 aaKnown RBP12.52□□□□□ -0.41
MACF1-222ENST00000494012 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 ITPRIPQ8IWB1 547 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 TMEM57Q8N5G2 664 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 KAZALD1Q96I82 304 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 MEIS3Q99687 375 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 RTFDC1Q9BY42 306 aaPredicted RBP12.52□□□□□ -0.41
MACF1-222ENST00000494012 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 TNNQ9UQP3 1299 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 XDHP47989 1333 aa12.52□□□□□ -0.41
MACF1-222ENST00000494012 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
MACF1-222ENST00000494012 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
MACF1-222ENST00000494012 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
MACF1-222ENST00000494012 ANKIB1Q9P2G1 1089 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms