RNA–Protein interactions for RNA: ENST00000493896.2

ECHDC2-218, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-218ENST00000493896 MYH3P11055 1940 aa17.25■□□□□ 0.35
ECHDC2-218ENST00000493896 ABCC4O15439 1325 aa17.24■□□□□ 0.35
ECHDC2-218ENST00000493896 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
ECHDC2-218ENST00000493896 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-218ENST00000493896 C9orf78Q9NZ63 289 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-218ENST00000493896 GRM8O00222 908 aa17.23■□□□□ 0.35
ECHDC2-218ENST00000493896 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
ECHDC2-218ENST00000493896 CASP7P55210 303 aa17.23■□□□□ 0.35
ECHDC2-218ENST00000493896 CTSWP56202 376 aa17.23■□□□□ 0.35
ECHDC2-218ENST00000493896 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
ECHDC2-218ENST00000493896 TOMM70O94826 608 aa17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 GRAPQ13588 217 aa17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 PLA2G12BQ9BX93 195 aa17.22■□□□□ 0.35
ECHDC2-218ENST00000493896 TAF1P21675 1872 aa17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 FER1L6Q2WGJ9 1857 aa17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 BBOX1O75936 387 aa17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 CCDC93Q567U6 631 aa17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.35
ECHDC2-218ENST00000493896 TRIM27P14373 513 aa17.2■□□□□ 0.34
ECHDC2-218ENST00000493896 ZKSCAN2Q63HK3 967 aa17.2■□□□□ 0.34
ECHDC2-218ENST00000493896 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
ECHDC2-218ENST00000493896 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-218ENST00000493896 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
ECHDC2-218ENST00000493896 RASSF7Q02833 373 aa17.19■□□□□ 0.34
ECHDC2-218ENST00000493896 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
ECHDC2-218ENST00000493896 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
ECHDC2-218ENST00000493896 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
ECHDC2-218ENST00000493896 UTYO14607 1347 aa17.19■□□□□ 0.34
ECHDC2-218ENST00000493896 NFKBIEO00221 500 aa17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 NBPF7P0C2Y1 421 aaPredicted RBP17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 ATP6V0A2Q9Y487 856 aa17.18■□□□□ 0.34
ECHDC2-218ENST00000493896 SBF1O95248 1867 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 SP8Q8IXZ3 490 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 USP44Q9H0E7 712 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 GREM2Q9H772 168 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 LTBP3Q9NS15 1303 aa17.17■□□□□ 0.34
ECHDC2-218ENST00000493896 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 CSF1RP07333 972 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 LMNB1P20700 586 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 FOXO4P98177 505 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 INTS3Q68E01 1043 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 COL4A1P02462 1669 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 CCDC88AQ3V6T2 1871 aa17.16■□□□□ 0.34
ECHDC2-218ENST00000493896 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 C9orf131Q5VYM1 1079 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 CHMP3Q9Y3E7 222 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
ECHDC2-218ENST00000493896 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 ITGA6P23229 1130 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 LMBR1LQ6UX01 489 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 SLC51AQ86UW1 340 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 PSMD1Q99460 953 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
ECHDC2-218ENST00000493896 ANKRD18BA2A2Z9 1011 aa17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 MPNDQ8N594 471 aa17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 DNAJC5GQ8N7S2 189 aa17.13■□□□□ 0.33
ECHDC2-218ENST00000493896 PRELPP51888 382 aa17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 DPP8Q6V1X1 898 aaPredicted RBP17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 TMEM57Q8N5G2 664 aa17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 RBM46Q8TBY0 533 aaKnown RBP17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 HDAC5Q9UQL6 1122 aa17.12■□□□□ 0.33
ECHDC2-218ENST00000493896 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 MS4A1P11836 297 aa17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 CCDC57Q2TAC2 916 aa17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 KDM2BQ8NHM5 1336 aa17.11■□□□□ 0.33
ECHDC2-218ENST00000493896 GNAI3P08754 354 aa17.1■□□□□ 0.33
ECHDC2-218ENST00000493896 HTRA3P83110 453 aa17.1■□□□□ 0.33
ECHDC2-218ENST00000493896 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
ECHDC2-218ENST00000493896 MPHOSPH8Q99549 860 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms