RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 STYK1Q6J9G0 422 aa22.5■■□□□ 1.19
PDLIM7-208ENST00000493815 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
PDLIM7-208ENST00000493815 ZNF219Q9P2Y4 722 aaPredicted RBP22.5■■□□□ 1.19
PDLIM7-208ENST00000493815 BCS1LQ9Y276 419 aa22.5■■□□□ 1.19
PDLIM7-208ENST00000493815 LAMB2P55268 1798 aa22.5■■□□□ 1.19
PDLIM7-208ENST00000493815 UBTFL1P0CB47 393 aaPredicted RBP22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 MS4A1P11836 297 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 SLC51AQ86UW1 340 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 TTLL6Q8N841 843 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 PLA2G12BQ9BX93 195 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 SEC31BQ9NQW1 1179 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 DALRD3Q5D0E6 543 aaKnown RBP22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 GREM2Q9H772 168 aa22.49■■□□□ 1.19
PDLIM7-208ENST00000493815 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 PRPF40BQ6NWY9 871 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 LMBR1LQ6UX01 489 aa22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 BICC1Q9H694 974 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 CHMP3Q9Y3E7 222 aa22.48■■□□□ 1.19
PDLIM7-208ENST00000493815 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
PDLIM7-208ENST00000493815 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
PDLIM7-208ENST00000493815 CNKSR1Q969H4 720 aa22.47■■□□□ 1.19
PDLIM7-208ENST00000493815 LRRFIP2Q9Y608 721 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-208ENST00000493815 COL4A1P02462 1669 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 GPR162Q16538 588 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 DLEC1Q9Y238 1755 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 ZBTB7BO15156 539 aaPredicted RBP22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 CSF1RP07333 972 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 GNAI3P08754 354 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 ANKRD44Q8N8A2 993 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 CELF1Q92879 486 aaKnown RBP22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 CRAMP1Q96RY5 1269 aa22.46■■□□□ 1.19
PDLIM7-208ENST00000493815 TAF1P21675 1872 aa22.45■■□□□ 1.18
PDLIM7-208ENST00000493815 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-208ENST00000493815 ALDH1B1P30837 517 aa22.45■■□□□ 1.18
PDLIM7-208ENST00000493815 C1orf115Q9H7X2 142 aa22.45■■□□□ 1.18
PDLIM7-208ENST00000493815 C21orf2O43822 256 aa22.44■■□□□ 1.18
PDLIM7-208ENST00000493815 SLX4Q8IY92 1834 aa22.44■■□□□ 1.18
PDLIM7-208ENST00000493815 ITGA6P23229 1130 aa22.43■■□□□ 1.18
PDLIM7-208ENST00000493815 GRAPQ13588 217 aa22.43■■□□□ 1.18
PDLIM7-208ENST00000493815 GRAPLQ8TC17 118 aaPredicted RBP22.43■■□□□ 1.18
PDLIM7-208ENST00000493815 CACNA1SQ13698 1873 aa22.42■■□□□ 1.18
PDLIM7-208ENST00000493815 RABL6Q3YEC7 729 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-208ENST00000493815 MYH3P11055 1940 aa22.42■■□□□ 1.18
PDLIM7-208ENST00000493815 PPEF1O14829 653 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-208ENST00000493815 GNAI2P04899 355 aa22.41■■□□□ 1.18
PDLIM7-208ENST00000493815 DDX19BQ9UMR2 479 aa22.41■■□□□ 1.18
PDLIM7-208ENST00000493815 RPS8P62241 208 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-208ENST00000493815 C7orf43Q8WVR3 580 aa22.4■■□□□ 1.18
PDLIM7-208ENST00000493815 IFIT5Q13325 482 aaKnown RBP22.39■■□□□ 1.18
PDLIM7-208ENST00000493815 ZNF594Q96JF6 807 aaPredicted RBP22.39■■□□□ 1.18
PDLIM7-208ENST00000493815 RTL9Q8NET4 1388 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 ANKRD18BA2A2Z9 1011 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 BBOX1O75936 387 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 CCDC57Q2TAC2 916 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 ANKRD18AQ8IVF6 992 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 CRBNQ96SW2 442 aa22.39■■□□□ 1.17
PDLIM7-208ENST00000493815 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
PDLIM7-208ENST00000493815 KLHDC4Q8TBB5 520 aa22.38■■□□□ 1.17
PDLIM7-208ENST00000493815 CDC5LQ99459 802 aaKnown RBP22.38■■□□□ 1.17
PDLIM7-208ENST00000493815 ZBTB40Q9NUA8 1239 aa22.37■■□□□ 1.17
PDLIM7-208ENST00000493815 HDAC5Q9UQL6 1122 aa22.37■■□□□ 1.17
PDLIM7-208ENST00000493815 ARHGAP27Q6ZUM4 889 aa22.36■■□□□ 1.17
PDLIM7-208ENST00000493815 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
PDLIM7-208ENST00000493815 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
PDLIM7-208ENST00000493815 IGHMBP2P38935 993 aaKnown RBP22.35■■□□□ 1.17
PDLIM7-208ENST00000493815 PNMA6EA0A0J9YXQ4 647 aa22.34■■□□□ 1.17
PDLIM7-208ENST00000493815 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
PDLIM7-208ENST00000493815 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
PDLIM7-208ENST00000493815 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.17
PDLIM7-208ENST00000493815 RFX5P48382 616 aaPredicted RBP22.33■■□□□ 1.17
PDLIM7-208ENST00000493815 SP8Q8IXZ3 490 aa22.33■■□□□ 1.17
PDLIM7-208ENST00000493815 MPHOSPH8Q99549 860 aa22.33■■□□□ 1.17
PDLIM7-208ENST00000493815 CCDC93Q567U6 631 aa22.33■■□□□ 1.16
PDLIM7-208ENST00000493815 PUS3Q9BZE2 481 aaKnown RBP22.33■■□□□ 1.16
PDLIM7-208ENST00000493815 BSDC1Q9NW68 430 aaPredicted RBP22.33■■□□□ 1.16
PDLIM7-208ENST00000493815 ARFGEF1Q9Y6D6 1849 aa22.32■■□□□ 1.16
PDLIM7-208ENST00000493815 GRIN3BO60391 1043 aa22.32■■□□□ 1.16
PDLIM7-208ENST00000493815 RASSF7Q02833 373 aa22.32■■□□□ 1.16
PDLIM7-208ENST00000493815 LDHAL6AQ6ZMR3 332 aa22.32■■□□□ 1.16
PDLIM7-208ENST00000493815 PA2G4Q9UQ80 394 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-208ENST00000493815 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
PDLIM7-208ENST00000493815 NFKBIEO00221 500 aa22.31■■□□□ 1.16
PDLIM7-208ENST00000493815 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-208ENST00000493815 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
PDLIM7-208ENST00000493815 GPSM2P81274 684 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 MTX1Q13505 466 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 SOGA3Q5TF21 947 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 CEP85Q6P2H3 762 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 TMC4Q7Z404 712 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 SIL1Q9H173 461 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 CNNM1Q9NRU3 951 aa22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 NSFL1CQ9UNZ2 370 aaKnown RBP22.3■■□□□ 1.16
PDLIM7-208ENST00000493815 LRRC24Q50LG9 513 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms