RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 DNAJB12Q9NXW2 375 aaKnown RBP7.25□□□□□ -1.25
CD46-217ENST00000493796 SLC6A14Q9UN76 642 aa7.25□□□□□ -1.25
CD46-217ENST00000493796 STARD13Q9Y3M8 1113 aa7.25□□□□□ -1.25
CD46-217ENST00000493796 MPSTP25325 297 aa7.24□□□□□ -1.25
CD46-217ENST00000493796 MTMR3Q13615 1198 aa7.24□□□□□ -1.25
CD46-217ENST00000493796 GPR152Q8TDT2 470 aa7.24□□□□□ -1.25
CD46-217ENST00000493796 GNB5O14775 395 aa7.23□□□□□ -1.25
CD46-217ENST00000493796 NPR3P17342 541 aa7.23□□□□□ -1.25
CD46-217ENST00000493796 ARID4AP29374 1257 aaPredicted RBP7.23□□□□□ -1.25
CD46-217ENST00000493796 NOM1Q5C9Z4 860 aaKnown RBP7.23□□□□□ -1.25
CD46-217ENST00000493796 DHX32Q7L7V1 743 aaKnown RBP7.23□□□□□ -1.25
CD46-217ENST00000493796 ATCAYQ86WG3 371 aa7.23□□□□□ -1.25
CD46-217ENST00000493796 UBAP1LF5GYI3 381 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 M0R082 166 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 PIK3R2O00459 728 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 GDF11O95390 407 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 ABL1P00519 1130 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 ALBP02768 609 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 EIF1AXP47813 144 aaKnown RBP7.22□□□□□ -1.25
CD46-217ENST00000493796 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
CD46-217ENST00000493796 PCSK7Q16549 785 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 C20orf204Q6ZNR8 217 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 NLRP13Q86W25 1043 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 MICALL1Q8N3F8 863 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 ZNF417Q8TAU3 575 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 TRPM4Q8TD43 1214 aa7.22□□□□□ -1.25
CD46-217ENST00000493796 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
CD46-217ENST00000493796 TLR7Q9NYK1 1049 aaKnown RBP7.22□□□□□ -1.25
CD46-217ENST00000493796 FNDC3AQ9Y2H6 1198 aaKnown RBP7.22□□□□□ -1.25
CD46-217ENST00000493796 ZBTB42B2RXF5 422 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 MMP20O60882 483 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 FAM13AO94988 1023 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 GPLD1P80108 840 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD46-217ENST00000493796 ZNF211Q13398 564 aaPredicted RBP7.21□□□□□ -1.26
CD46-217ENST00000493796 ALKBH2Q6NS38 261 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 TMEM151AQ8N4L1 468 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 EDEM1Q92611 657 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
CD46-217ENST00000493796 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 PRDM6Q9NQX0 595 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 NAGPAQ9UK23 515 aa7.21□□□□□ -1.26
CD46-217ENST00000493796 SERPINB4P48594 390 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 NRLP54845 237 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 TXNDC2Q86VQ3 553 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 TRIM11Q96F44 468 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 ANO2Q9NQ90 1003 aa7.2□□□□□ -1.26
CD46-217ENST00000493796 ICMTO60725 284 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 PDGFAP04085 211 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 PSAPP07602 524 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
CD46-217ENST00000493796 COL8A1P27658 744 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 MZF1P28698 734 aaPredicted RBP7.19□□□□□ -1.26
CD46-217ENST00000493796 SOX18P35713 384 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 MLLT1Q03111 559 aaPredicted RBP7.19□□□□□ -1.26
CD46-217ENST00000493796 PLAURQ03405 335 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 DNM1Q05193 864 aaKnown RBP7.19□□□□□ -1.26
CD46-217ENST00000493796 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
CD46-217ENST00000493796 PSAPL1Q6NUJ1 521 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 FAM35AQ86V20 835 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 DCAF5Q96JK2 942 aa7.19□□□□□ -1.26
CD46-217ENST00000493796 RPLP1P05386 114 aaKnown RBP7.18□□□□□ -1.26
CD46-217ENST00000493796 CPB1P15086 417 aa7.18□□□□□ -1.26
CD46-217ENST00000493796 PCSK2P16519 638 aa7.18□□□□□ -1.26
CD46-217ENST00000493796 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
CD46-217ENST00000493796 NUDT8Q8WV74 236 aa7.18□□□□□ -1.26
CD46-217ENST00000493796 JPH1Q9HDC5 661 aaPredicted RBP7.18□□□□□ -1.26
CD46-217ENST00000493796 NOP53Q9NZM5 478 aaKnown RBP7.18□□□□□ -1.26
CD46-217ENST00000493796 LILRB5O75023 590 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 NID1P14543 1247 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 PERM1Q5SV97 790 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
CD46-217ENST00000493796 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 ELP3Q9H9T3 547 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
CD46-217ENST00000493796 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 H3BRB1 525 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 FZD6O60353 706 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 RGS9O75916 674 aaPredicted RBP7.16□□□□□ -1.26
CD46-217ENST00000493796 SIK1P57059 783 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 AAMPQ13685 434 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 ECM1Q16610 540 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 TTC39BQ5VTQ0 682 aaPredicted RBP7.16□□□□□ -1.26
CD46-217ENST00000493796 ELMSAN1Q6PJG2 1045 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 XKR5Q6UX68 686 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 HFE2Q6ZVN8 426 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 ZNF438Q7Z4V0 828 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 NSUN5Q96P11 429 aaKnown RBP7.16□□□□□ -1.26
CD46-217ENST00000493796 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
CD46-217ENST00000493796 ABI2Q9NYB9 513 aaPredicted RBP7.16□□□□□ -1.26
CD46-217ENST00000493796 POLIQ9UNA4 740 aa7.16□□□□□ -1.26
CD46-217ENST00000493796 J3QW42 95 aa7.15□□□□□ -1.26
CD46-217ENST00000493796 BRD1O95696 1058 aa7.15□□□□□ -1.26
CD46-217ENST00000493796 EIF2AK2P19525 551 aaKnown RBP7.15□□□□□ -1.26
CD46-217ENST00000493796 AFF1P51825 1210 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms