RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ANKRD30BQ9BXX2 1392 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 TMEM110-MUSTN1A8MSY1 372 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 ERCC3P19447 782 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 PCK1P35558 622 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 UBASH3AP57075 661 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 KRT83P78385 493 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC85AQ96PX6 553 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-221ENST00000493795 SEPT10Q9P0V9 454 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 FYB2Q5VWT5 728 aa8.94□□□□□ -0.98
BRCA1-221ENST00000493795 RPGRIP1LQ68CZ1 1315 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 IARSP41252 1262 aaKnown RBP8.93□□□□□ -0.98
BRCA1-221ENST00000493795 VCXQ9H320 206 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 KAT14Q9H8E8 782 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 VPS18Q9P253 973 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 MGEA5O60502 916 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 NCAPGQ9BPX3 1015 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 NKIRAS1Q9NYS0 192 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 SMIM23A6NLE4 172 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 ARID4AP29374 1257 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-221ENST00000493795 RSPH3Q86UC2 560 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 ZEB2O60315 1214 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 GJB2P29033 226 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 PPP1R7Q15435 360 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 CLUL1Q15846 466 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 CEP128Q6ZU80 1094 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC117Q8IWD4 279 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-221ENST00000493795 CABP5Q9NP86 173 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 DNAI1Q9UI46 699 aa8.93□□□□□ -0.98
BRCA1-221ENST00000493795 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 A0A1B0GUL7 405 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 TRMT1LQ7Z2T5 733 aaKnown RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 AFAP1L2Q8N4X5 818 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 FAM76AQ8TAV0 307 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 WHAMMQ8TF30 809 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 SUDS3Q9H7L9 328 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 PDS5BQ9NTI5 1447 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 BMP15O95972 392 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 SSFA2P28290 1259 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 BOLA2Q9H3K6 86 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 FAM13AO94988 1023 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 PDE1CQ14123 709 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 KRT86O43790 486 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 FCHSD2O94868 740 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 CNGA1P29973 690 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 TERF1P54274 439 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 PDE4BQ07343 736 aa8.92□□□□□ -0.98
BRCA1-221ENST00000493795 GKAP1Q5VSY0 366 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 CACYBPQ9HB71 228 aaKnown RBP8.92□□□□□ -0.98
BRCA1-221ENST00000493795 ZPR1O75312 459 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 STAT6P42226 847 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 UBE2HP62256 183 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TNNC1P63316 161 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 CALCOCO2Q13137 446 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TRPC3Q13507 836 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TMEM67Q5HYA8 995 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 RNF168Q8IYW5 571 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 PANK2Q9BZ23 570 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 RASSF4Q9H2L5 321 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 ATP6V0A2Q9Y487 856 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 HSPA1LP34931 641 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 PROSER2Q86WR7 435 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TCHPQ9BT92 498 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 USP16Q9Y5T5 823 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TDRD9Q8NDG6 1382 aaKnown RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 VAV2P52735 878 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 PRR16Q569H4 304 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 ISM2Q6H9L7 571 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 MAK16Q9BXY0 300 aaKnown RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 ZMYND15Q9H091 742 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 MTUS1Q9ULD2 1270 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 EXOC6BQ9Y2D4 811 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 SKILP12757 684 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 CLNS1AP54105 237 aaKnown RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 INF2Q27J81 1249 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 SH2D4BQ5SQS7 431 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 TNPO1Q92973 898 aaKnown RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 RAD54L2Q9Y4B4 1467 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 BUB1BO60566 1050 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 HLA-DOAP06340 250 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 NBPF7P0C2Y1 421 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 SYKP43405 635 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 METAP2P50579 478 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
BRCA1-221ENST00000493795 GPR161Q8N6U8 529 aaKnown RBP8.91□□□□□ -0.98
BRCA1-221ENST00000493795 NUTM2BA6NNL0 878 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 NUTM2EB1AL46 878 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 PPFIA2O75334 1257 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 TRAF1Q13077 416 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 PHLDB2Q86SQ0 1253 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC25Q86WR0 208 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 NUTM2AQ8IVF1 878 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 CCDC170Q8IYT3 715 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms