RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
UPF3A-210ENST00000493727 RRAGCQ9HB90 399 aa15.93■□□□□ 0.14
UPF3A-210ENST00000493727 PRELPP51888 382 aa15.92■□□□□ 0.14
UPF3A-210ENST00000493727 RASSF7Q02833 373 aa15.92■□□□□ 0.14
UPF3A-210ENST00000493727 USPL1Q5W0Q7 1092 aa15.92■□□□□ 0.14
UPF3A-210ENST00000493727 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
UPF3A-210ENST00000493727 COL15A1P39059 1388 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 TRIM6-TRIM34B2RNG4 842 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 CYP19A1P11511 503 aaPredicted RBP15.91■□□□□ 0.14
UPF3A-210ENST00000493727 SLC39A6Q13433 755 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 TTC13Q8NBP0 860 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 RBM27Q9P2N5 1060 aaKnown RBP15.91■□□□□ 0.14
UPF3A-210ENST00000493727 FAM198AQ9UFP1 575 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 TSKSQ9UJT2 592 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 DICER1Q9UPY3 1922 aaKnown RBP15.91■□□□□ 0.14
UPF3A-210ENST00000493727 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
UPF3A-210ENST00000493727 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-210ENST00000493727 GNAT3A8MTJ3 354 aa15.9■□□□□ 0.14
UPF3A-210ENST00000493727 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
UPF3A-210ENST00000493727 TEFQ10587 303 aa15.9■□□□□ 0.14
UPF3A-210ENST00000493727 NFIXQ14938 502 aa15.9■□□□□ 0.14
UPF3A-210ENST00000493727 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
UPF3A-210ENST00000493727 HRO43593 1189 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 STARD3NLO95772 234 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 HIC1Q14526 733 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 RSPH6AQ9H0K4 717 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 SCN7AQ01118 1682 aa15.89■□□□□ 0.13
UPF3A-210ENST00000493727 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
UPF3A-210ENST00000493727 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
UPF3A-210ENST00000493727 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-210ENST00000493727 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-210ENST00000493727 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
UPF3A-210ENST00000493727 A0A087WZG4 1122 aa15.87■□□□□ 0.13
UPF3A-210ENST00000493727 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
UPF3A-210ENST00000493727 BHMG1C9JSJ3 638 aaPredicted RBP15.87■□□□□ 0.13
UPF3A-210ENST00000493727 LMNB1P20700 586 aa15.87■□□□□ 0.13
UPF3A-210ENST00000493727 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
UPF3A-210ENST00000493727 PADI6Q6TGC4 694 aa15.87■□□□□ 0.13
UPF3A-210ENST00000493727 NFKBIEO00221 500 aa15.86■□□□□ 0.13
UPF3A-210ENST00000493727 ZC3H15Q8WU90 426 aaKnown RBP15.86■□□□□ 0.13
UPF3A-210ENST00000493727 RABGEF1Q9UJ41 708 aa15.86■□□□□ 0.13
UPF3A-210ENST00000493727 FECHP22830 423 aa15.85■□□□□ 0.13
UPF3A-210ENST00000493727 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
UPF3A-210ENST00000493727 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
UPF3A-210ENST00000493727 SERPINB2P05120 415 aa15.84■□□□□ 0.13
UPF3A-210ENST00000493727 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
UPF3A-210ENST00000493727 CANXP27824 592 aaKnown RBP15.84■□□□□ 0.13
UPF3A-210ENST00000493727 TTLL6Q8N841 843 aa15.84■□□□□ 0.13
UPF3A-210ENST00000493727 IL17REQ8NFR9 667 aa15.84■□□□□ 0.13
UPF3A-210ENST00000493727 KIAA1468Q9P260 1216 aa15.84■□□□□ 0.13
UPF3A-210ENST00000493727 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
UPF3A-210ENST00000493727 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
UPF3A-210ENST00000493727 POTECB2RU33 542 aa15.83■□□□□ 0.12
UPF3A-210ENST00000493727 APAF1O14727 1248 aa15.83■□□□□ 0.12
UPF3A-210ENST00000493727 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
UPF3A-210ENST00000493727 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
UPF3A-210ENST00000493727 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
UPF3A-210ENST00000493727 EIF5P55010 431 aaKnown RBP15.82■□□□□ 0.12
UPF3A-210ENST00000493727 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
UPF3A-210ENST00000493727 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
UPF3A-210ENST00000493727 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-210ENST00000493727 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
UPF3A-210ENST00000493727 CACNA1SQ13698 1873 aa15.82■□□□□ 0.12
UPF3A-210ENST00000493727 C3orf80F5H4A9 247 aa15.81■□□□□ 0.12
UPF3A-210ENST00000493727 HSPA1AP0DMV8 641 aaKnown RBP15.81■□□□□ 0.12
UPF3A-210ENST00000493727 HSPA1BP0DMV9 641 aaKnown RBP15.81■□□□□ 0.12
UPF3A-210ENST00000493727 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
UPF3A-210ENST00000493727 BCORQ6W2J9 1755 aa15.81■□□□□ 0.12
UPF3A-210ENST00000493727 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
UPF3A-210ENST00000493727 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
UPF3A-210ENST00000493727 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-210ENST00000493727 PACS2Q86VP3 889 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 PHACTR3Q96KR7 559 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
UPF3A-210ENST00000493727 H0YIN7 160 aa15.79■□□□□ 0.12
UPF3A-210ENST00000493727 ZMYND10O75800 440 aa15.79■□□□□ 0.12
UPF3A-210ENST00000493727 NFE2L2Q16236 605 aa15.79■□□□□ 0.12
UPF3A-210ENST00000493727 HTATSF1O43719 755 aaKnown RBP15.78■□□□□ 0.12
UPF3A-210ENST00000493727 TMPOP42166 694 aaKnown RBP15.78■□□□□ 0.12
UPF3A-210ENST00000493727 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
UPF3A-210ENST00000493727 RIPK4P57078 832 aa15.77■□□□□ 0.12
UPF3A-210ENST00000493727 LMOD3Q0VAK6 560 aa15.77■□□□□ 0.12
UPF3A-210ENST00000493727 TBC1D9BQ66K14 1250 aa15.77■□□□□ 0.12
UPF3A-210ENST00000493727 PRR5LQ6MZQ0 368 aa15.77■□□□□ 0.12
UPF3A-210ENST00000493727 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.12
UPF3A-210ENST00000493727 BICDL1Q6ZP65 573 aa15.76■□□□□ 0.11
UPF3A-210ENST00000493727 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
UPF3A-210ENST00000493727 TATDN2Q93075 761 aa15.76■□□□□ 0.11
UPF3A-210ENST00000493727 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
UPF3A-210ENST00000493727 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
UPF3A-210ENST00000493727 SCN4AP35499 1836 aa15.75■□□□□ 0.11
UPF3A-210ENST00000493727 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms