RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 COL4A1P02462 1669 aa15.24■□□□□ 0.03
RHBDF1-211ENST00000493647 NPR1P16066 1061 aa15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 STYK1Q6J9G0 422 aa15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 SLC51AQ86UW1 340 aa15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 MASTLQ96GX5 879 aa15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 SEC31BQ9NQW1 1179 aa15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
RHBDF1-211ENST00000493647 GNAI3P08754 354 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 LMBR1LQ6UX01 489 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 ZNF622Q969S3 477 aaKnown RBP eCLIP15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 GREM2Q9H772 168 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 PDZRN3Q9UPQ7 1066 aa15.22■□□□□ 0.03
RHBDF1-211ENST00000493647 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 CRAMP1Q96RY5 1269 aa15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 DDX19BQ9UMR2 479 aa15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 SRCAPQ6ZRS2 3230 aa15.21■□□□□ 0.03
RHBDF1-211ENST00000493647 RTL9Q8NET4 1388 aa15.21■□□□□ 0.02
RHBDF1-211ENST00000493647 GNAI2P04899 355 aa15.2■□□□□ 0.02
RHBDF1-211ENST00000493647 CELF1Q92879 486 aaKnown RBP15.2■□□□□ 0.02
RHBDF1-211ENST00000493647 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
RHBDF1-211ENST00000493647 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
RHBDF1-211ENST00000493647 PIM2Q9P1W9 311 aa15.2■□□□□ 0.02
RHBDF1-211ENST00000493647 DLEC1Q9Y238 1755 aa15.19■□□□□ 0.02
RHBDF1-211ENST00000493647 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
RHBDF1-211ENST00000493647 PRPF40BQ6NWY9 871 aaKnown RBP15.19■□□□□ 0.02
RHBDF1-211ENST00000493647 DDX46Q7L014 1031 aaKnown RBP15.19■□□□□ 0.02
RHBDF1-211ENST00000493647 TTLL6Q8N841 843 aa15.19■□□□□ 0.02
RHBDF1-211ENST00000493647 ITGA6P23229 1130 aa15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 GRAPQ13588 217 aa15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 GRAPLQ8TC17 118 aaPredicted RBP15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 C7orf43Q8WVR3 580 aa15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 CNKSR1Q969H4 720 aa15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
RHBDF1-211ENST00000493647 YBX3P16989 372 aaKnown RBP eCLIP15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 ALDH1B1P30837 517 aa15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 MTX1Q13505 466 aa15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
RHBDF1-211ENST00000493647 BRCA1P38398 1863 aaKnown RBP15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 SLX4Q8IY92 1834 aa15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 EXOC6Q8TAG9 804 aa15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
RHBDF1-211ENST00000493647 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 IFIT5Q13325 482 aaKnown RBP15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 CEP85Q6P2H3 762 aa15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 KLHDC4Q8TBB5 520 aa15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 MYH3P11055 1940 aa15.15■□□□□ 0.02
RHBDF1-211ENST00000493647 TAF1P21675 1872 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 C21orf2O43822 256 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 BBOX1O75936 387 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 ATP8B2P98198 1209 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 PUS3Q9BZE2 481 aaKnown RBP15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 SNED1Q8TER0 1413 aa15.14■□□□□ 0.01
RHBDF1-211ENST00000493647 SRGAP3O43295 1099 aa15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 POLA2Q14181 598 aa15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 CHMP4BQ9H444 224 aaKnown RBP15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 PA2G4Q9UQ80 394 aaKnown RBP15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 ATP6V0A2Q9Y487 856 aa15.13■□□□□ 0.01
RHBDF1-211ENST00000493647 SP8Q8IXZ3 490 aa15.12■□□□□ 0.01
RHBDF1-211ENST00000493647 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
RHBDF1-211ENST00000493647 BSDC1Q9NW68 430 aaPredicted RBP15.12■□□□□ 0.01
RHBDF1-211ENST00000493647 PCDHB15Q9Y5E8 787 aa15.12■□□□□ 0.01
RHBDF1-211ENST00000493647 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
RHBDF1-211ENST00000493647 LRRC24Q50LG9 513 aa15.11■□□□□ 0.01
RHBDF1-211ENST00000493647 GPSM2P81274 684 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 GPR162Q16538 588 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 TAF7LQ5H9L4 462 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 COPRSQ9NQ92 184 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
RHBDF1-211ENST00000493647 LRRC37AA6NMS7 1700 aa15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 NFKBIEO00221 500 aa15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 CCDC93Q567U6 631 aa15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 ATG9AQ7Z3C6 839 aa15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 RPAP2Q8IXW5 612 aaPredicted RBP15.09■□□□□ 0.01
RHBDF1-211ENST00000493647 MPHOSPH8Q99549 860 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms