RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
SGIP1-213ENST00000493564 GCKRQ14397 625 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 SLC4A10Q6U841 1118 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 SP8Q8IXZ3 490 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
SGIP1-213ENST00000493564 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
SGIP1-213ENST00000493564 GLTPD2A6NH11 291 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 H7C1W4 665 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 DDNO94850 711 aaPredicted RBP12.02□□□□□ -0.49
SGIP1-213ENST00000493564 RPS8P62241 208 aaKnown RBP12.02□□□□□ -0.49
SGIP1-213ENST00000493564 BEND3Q5T5X7 828 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 LINS1Q8NG48 757 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
SGIP1-213ENST00000493564 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
SGIP1-213ENST00000493564 LAMB2P55268 1798 aa12.01□□□□□ -0.49
SGIP1-213ENST00000493564 HSP90B1P14625 803 aaKnown RBP12.01□□□□□ -0.49
SGIP1-213ENST00000493564 CCDC152Q4G0S7 254 aa12.01□□□□□ -0.49
SGIP1-213ENST00000493564 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
SGIP1-213ENST00000493564 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
SGIP1-213ENST00000493564 MPNDQ8N594 471 aa12.01□□□□□ -0.49
SGIP1-213ENST00000493564 PSMD1Q99460 953 aa12.01□□□□□ -0.49
SGIP1-213ENST00000493564 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
SGIP1-213ENST00000493564 GPSM2P81274 684 aa12□□□□□ -0.49
SGIP1-213ENST00000493564 AOC3Q16853 763 aa12□□□□□ -0.49
SGIP1-213ENST00000493564 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
SGIP1-213ENST00000493564 GREM2Q9H772 168 aa12□□□□□ -0.49
SGIP1-213ENST00000493564 CDHR2Q9BYE9 1310 aa12□□□□□ -0.49
SGIP1-213ENST00000493564 POTECB2RU33 542 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 PPIP5K2O43314 1243 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 CASP7P55210 303 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 CTSWP56202 376 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
SGIP1-213ENST00000493564 JDP2Q8WYK2 163 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
SGIP1-213ENST00000493564 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
SGIP1-213ENST00000493564 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 COL4A1P02462 1669 aa11.99□□□□□ -0.49
SGIP1-213ENST00000493564 C6orf229H3BNL8 230 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 FZD9O00144 591 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 VEGFAP15692 232 aaPredicted RBP11.98□□□□□ -0.49
SGIP1-213ENST00000493564 SRCIN1Q9C0H9 1055 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 C9orf78Q9NZ63 289 aaPredicted RBP11.98□□□□□ -0.49
SGIP1-213ENST00000493564 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
SGIP1-213ENST00000493564 GJA3Q9Y6H8 435 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
SGIP1-213ENST00000493564 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
SGIP1-213ENST00000493564 TOMM70O94826 608 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 TMC4Q7Z404 712 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 SUPT20HQ8NEM7 779 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
SGIP1-213ENST00000493564 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 POLLQ9UGP5 575 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
SGIP1-213ENST00000493564 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.49
SGIP1-213ENST00000493564 EIF6P56537 245 aaKnown RBP11.96□□□□□ -0.49
SGIP1-213ENST00000493564 FOXO4P98177 505 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 WASHC4Q2M389 1173 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 EPHA10Q5JZY3 1008 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
SGIP1-213ENST00000493564 COL4A5P29400 1685 aa11.96□□□□□ -0.5
SGIP1-213ENST00000493564 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 PTPRCP08575 1304 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 GRM8O00222 908 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 CSF1RP07333 972 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 NBPF7P0C2Y1 421 aaPredicted RBP11.95□□□□□ -0.5
SGIP1-213ENST00000493564 ITGA6P23229 1130 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 RARSP54136 660 aaKnown RBP11.95□□□□□ -0.5
SGIP1-213ENST00000493564 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 TBC1D16Q8TBP0 767 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 CDC5LQ99459 802 aaKnown RBP11.95□□□□□ -0.5
SGIP1-213ENST00000493564 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
SGIP1-213ENST00000493564 RAD17O75943 681 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 POTEJP0CG39 1038 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 CXCL9Q07325 125 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 KIAA2012Q0VF49 1180 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 LMBR1LQ6UX01 489 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
SGIP1-213ENST00000493564 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 KCNQ5Q9NR82 932 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
SGIP1-213ENST00000493564 ANKRD18BA2A2Z9 1011 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 BCAR3O75815 825 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 UFL1O94874 794 aa11.93□□□□□ -0.5
SGIP1-213ENST00000493564 CT47B1P0C2W7 299 aaPredicted RBP11.93□□□□□ -0.5
SGIP1-213ENST00000493564 IGHMBP2P38935 993 aaKnown RBP11.93□□□□□ -0.5
SGIP1-213ENST00000493564 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms