RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 LMBR1LQ6UX01 489 aa14.43□□□□□ -0.1
LSM2-214ENST00000493387 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
LSM2-214ENST00000493387 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
LSM2-214ENST00000493387 RBM17Q96I25 401 aaKnown RBP14.43□□□□□ -0.1
LSM2-214ENST00000493387 RTL9Q8NET4 1388 aa14.43□□□□□ -0.1
LSM2-214ENST00000493387 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
LSM2-214ENST00000493387 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 EPHA10Q5JZY3 1008 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 STYK1Q6J9G0 422 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 C2CD5Q86YS7 1000 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 ANKRD44Q8N8A2 993 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 MASTLQ96GX5 879 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 CHMP3Q9Y3E7 222 aa14.42□□□□□ -0.1
LSM2-214ENST00000493387 ANKRD18BA2A2Z9 1011 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 HMMRO75330 724 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 SRGNP10124 158 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 ALDH1B1P30837 517 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 IFIT5Q13325 482 aaKnown RBP14.41□□□□□ -0.1
LSM2-214ENST00000493387 CRAMP1Q96RY5 1269 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
LSM2-214ENST00000493387 C1orf115Q9H7X2 142 aa14.41□□□□□ -0.1
LSM2-214ENST00000493387 LAMB2P55268 1798 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 SRGAP3O43295 1099 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 ITGA6P23229 1130 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 CEP85Q6P2H3 762 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 C3orf67Q6ZVT6 689 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 CNKSR1Q969H4 720 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 GREM2Q9H772 168 aa14.4□□□□□ -0.1
LSM2-214ENST00000493387 DDX60Q8IY21 1712 aaKnown RBP14.39□□□□□ -0.11
LSM2-214ENST00000493387 BBOX1O75936 387 aa14.39□□□□□ -0.11
LSM2-214ENST00000493387 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
LSM2-214ENST00000493387 TAF7LQ5H9L4 462 aa14.39□□□□□ -0.11
LSM2-214ENST00000493387 TMC4Q7Z404 712 aa14.39□□□□□ -0.11
LSM2-214ENST00000493387 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
LSM2-214ENST00000493387 ZNF622Q969S3 477 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSM2-214ENST00000493387 DPEP1P16444 411 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
LSM2-214ENST00000493387 RPS8P62241 208 aaKnown RBP14.38□□□□□ -0.11
LSM2-214ENST00000493387 GRAPQ13588 217 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 POLA2Q14181 598 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 ANKRD18AQ8IVF6 992 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 GRAPLQ8TC17 118 aaPredicted RBP14.38□□□□□ -0.11
LSM2-214ENST00000493387 SSH3Q8TE77 659 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
LSM2-214ENST00000493387 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 MYH3P11055 1940 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
LSM2-214ENST00000493387 CHRNA5P30532 468 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 TTLL6Q8N841 843 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 MPHOSPH8Q99549 860 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
LSM2-214ENST00000493387 PIM2Q9P1W9 311 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 ANKRD31Q8N7Z5 1873 aa14.37□□□□□ -0.11
LSM2-214ENST00000493387 A0A0G2JLW4 131 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
LSM2-214ENST00000493387 RWDD1Q9H446 243 aaPredicted RBP14.36□□□□□ -0.11
LSM2-214ENST00000493387 COPRSQ9NQ92 184 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 SEC31BQ9NQW1 1179 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 LRP5O75197 1615 aa14.36□□□□□ -0.11
LSM2-214ENST00000493387 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
LSM2-214ENST00000493387 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
LSM2-214ENST00000493387 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
LSM2-214ENST00000493387 SYT17Q9BSW7 474 aa14.35□□□□□ -0.11
LSM2-214ENST00000493387 BSDC1Q9NW68 430 aaPredicted RBP14.35□□□□□ -0.11
LSM2-214ENST00000493387 CIAO1O76071 339 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 KCNA3P22001 575 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 PTPN12Q05209 780 aaKnown RBP14.34□□□□□ -0.11
LSM2-214ENST00000493387 G3BP1Q13283 466 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSM2-214ENST00000493387 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 DALRD3Q5D0E6 543 aaKnown RBP14.34□□□□□ -0.11
LSM2-214ENST00000493387 CC2D2BQ6DHV5 1058 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 LDHAL6AQ6ZMR3 332 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 SIRT2Q8IXJ6 389 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 CELF1Q92879 486 aaKnown RBP14.34□□□□□ -0.11
LSM2-214ENST00000493387 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
LSM2-214ENST00000493387 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
LSM2-214ENST00000493387 EYA2O00167 538 aa14.33□□□□□ -0.12
LSM2-214ENST00000493387 PPEF1O14829 653 aaPredicted RBP14.33□□□□□ -0.12
LSM2-214ENST00000493387 SOGA3Q5TF21 947 aa14.33□□□□□ -0.12
LSM2-214ENST00000493387 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
LSM2-214ENST00000493387 SP8Q8IXZ3 490 aa14.33□□□□□ -0.12
LSM2-214ENST00000493387 RAB11FIP3O75154 756 aa14.32□□□□□ -0.12
LSM2-214ENST00000493387 SURF6O75683 361 aaKnown RBP14.32□□□□□ -0.12
LSM2-214ENST00000493387 IL15P40933 162 aaPredicted RBP14.32□□□□□ -0.12
LSM2-214ENST00000493387 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
LSM2-214ENST00000493387 ERC1Q8IUD2 1116 aa14.32□□□□□ -0.12
LSM2-214ENST00000493387 NLGN2Q8NFZ4 835 aa14.32□□□□□ -0.12
LSM2-214ENST00000493387 ZNF594Q96JF6 807 aaPredicted RBP14.32□□□□□ -0.12
LSM2-214ENST00000493387 ANKRD2Q9GZV1 360 aa14.32□□□□□ -0.12
LSM2-214ENST00000493387 ATP6V0A2Q9Y487 856 aa14.32□□□□□ -0.12
LSM2-214ENST00000493387 OS9Q13438 667 aaPredicted RBP14.31□□□□□ -0.12
LSM2-214ENST00000493387 GCC1Q96CN9 775 aa14.31□□□□□ -0.12
LSM2-214ENST00000493387 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
LSM2-214ENST00000493387 PPP4R2Q9NY27 417 aa14.31□□□□□ -0.12
LSM2-214ENST00000493387 PA2G4Q9UQ80 394 aaKnown RBP14.31□□□□□ -0.12
LSM2-214ENST00000493387 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms