RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 NPHP4O75161 1426 aaPredicted RBP4.46□□□□□ -1.7
SNX13-209ENST00000492626 SLIT1O75093 1534 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 PNMA6FA0A0J9YX94 578 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 PPEF1O14829 653 aaPredicted RBP4.46□□□□□ -1.7
SNX13-209ENST00000492626 C11orf91Q3C1V1 193 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 POTEAQ6S8J7 498 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 CAPN12Q6ZSI9 719 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 CNKSR1Q969H4 720 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 FNDC3AQ9Y2H6 1198 aaKnown RBP4.46□□□□□ -1.7
SNX13-209ENST00000492626 ADH1CP00326 375 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 NPR3P17342 541 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 SCNN1DP51172 638 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 NBPF1Q3BBV0 1214 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 PIK3R5Q8WYR1 880 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 CAPN10Q9HC96 672 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.46□□□□□ -1.7
SNX13-209ENST00000492626 HCN4Q9Y3Q4 1203 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 SLC27A3Q5K4L6 730 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 FBF1Q8TES7 1133 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 EDEM1Q92611 657 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 IFT43Q96FT9 208 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 SLC4A9Q96Q91 983 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 PURBQ96QR8 312 aaKnown RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 ZSCAN10Q96SZ4 725 aaPredicted RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 METTL5Q9NRN9 209 aaKnown RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 CCDC87Q9NVE4 849 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 DCCP43146 1447 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 A0A1W2PRU2 124 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 RNF223E7ERA6 249 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 CDK2AP1O14519 115 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 TATP17735 454 aaPredicted RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 ATP2B1P20020 1258 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 ZAP70P43403 619 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 TAGLNQ01995 201 aaKnown RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 DGKZQ13574 1117 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 RTN1Q16799 776 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 NT5DC4Q86YG4 428 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 AIDAQ96BJ3 306 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 MYO19Q96H55 970 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 C2orf49Q9BVC5 232 aaPredicted RBP4.45□□□□□ -1.7
SNX13-209ENST00000492626 GJA3Q9Y6H8 435 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 KIF27Q86VH2 1401 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 BICDL1Q6ZP65 573 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 SAP130Q9H0E3 1048 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 PPP4R2Q9NY27 417 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 TLL2Q9Y6L7 1015 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 RTEL1-TNFRSF6BF6WH68 1400 aa4.45□□□□□ -1.7
SNX13-209ENST00000492626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNX13-209ENST00000492626 COL24A1Q17RW2 1714 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 POTEB3A0JP26 581 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 ADH1AP07327 375 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 RXRBP28702 533 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 FMR1Q06787 632 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNX13-209ENST00000492626 COX20Q5RI15 118 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 C9orf131Q5VYM1 1079 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 POTEBQ6S5H4 581 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 CDK15Q96Q40 435 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 ESYT1Q9BSJ8 1104 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 UPP2O95045 317 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 EIF4BP23588 611 aaKnown RBP4.44□□□□□ -1.7
SNX13-209ENST00000492626 GNA15P30679 374 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 TMC4Q7Z404 712 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 PUS7Q96PZ0 661 aaKnown RBP4.44□□□□□ -1.7
SNX13-209ENST00000492626 POLIQ9UNA4 740 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 ARID4BQ4LE39 1312 aaPredicted RBP4.44□□□□□ -1.7
SNX13-209ENST00000492626 PLCH2O75038 1416 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 ALDH16A1Q8IZ83 802 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 GPR152Q8TDT2 470 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 HCSTQ9UBK5 93 aa4.44□□□□□ -1.7
SNX13-209ENST00000492626 RGS12O14924 1447 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 CLTCQ00610 1675 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 NBPF10Q6P3W6 841 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 RHPN1Q8TCX5 695 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 PHACTR1Q9C0D0 580 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 SAMD9LQ8IVG5 1584 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 EPB42P16452 691 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 C1QTNF8P60827 252 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 RBM6P78332 1123 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 L3MBTL2Q969R5 705 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 MAP3K5Q99683 1374 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 PZPP20742 1482 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 YY1P25490 414 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 NOS2P35228 1153 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 CLN3Q13286 438 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 TEAD4Q15561 434 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 DIEXFQ68CQ4 756 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 MPNDQ8N594 471 aa4.43□□□□□ -1.7
SNX13-209ENST00000492626 SCAF11Q99590 1463 aaKnown RBP4.43□□□□□ -1.7
SNX13-209ENST00000492626 STAU1O95793 577 aaKnown RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 ALDH1A1P00352 501 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 SKOR1P84550 965 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 XAGE2Q96GT9 111 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 FAM161BQ96MY7 647 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 ANKIB1Q9P2G1 1089 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 INPP5FQ9Y2H2 1132 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 SETD5Q9C0A6 1442 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 LRP6O75581 1613 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNX13-209ENST00000492626 MTFR1Q15390 333 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms