RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 NYXQ9GZU5 481 aa13□□□□□ -0.33
TNFRSF9-203ENST00000492571 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF9-203ENST00000492571 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNFRSF9-203ENST00000492571 FAM205CA6NFA0 338 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 KCNQ3O43525 872 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 GRM1Q13255 1194 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 PSMD1Q99460 953 aa12.98□□□□□ -0.33
TNFRSF9-203ENST00000492571 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 PER1O15534 1290 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 NEFMP07197 916 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 MLLT1Q03111 559 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
TNFRSF9-203ENST00000492571 FAM161AQ3B820 660 aa12.96□□□□□ -0.33
TNFRSF9-203ENST00000492571 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
TNFRSF9-203ENST00000492571 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF9-203ENST00000492571 CAPNS2Q96L46 248 aa12.96□□□□□ -0.33
TNFRSF9-203ENST00000492571 SCN4AP35499 1836 aa12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 DICER1Q9UPY3 1922 aaKnown RBP12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
TNFRSF9-203ENST00000492571 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 SCN7AQ01118 1682 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 CA12O43570 354 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 HTATSF1O43719 755 aaKnown RBP12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 SLC34A2O95436 690 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 MAP2K2P36507 400 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 MCM10Q7L590 875 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
TNFRSF9-203ENST00000492571 ERVV-1B6SEH8 477 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 EPS15P42566 896 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 HLFQ16534 295 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TNFRSF9-203ENST00000492571 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 VPS33BQ9H267 617 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
TNFRSF9-203ENST00000492571 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 PPIP5K2O43314 1243 aa12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 SCNN1DP51172 638 aa12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 CRAMP1Q96RY5 1269 aa12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
TNFRSF9-203ENST00000492571 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
TNFRSF9-203ENST00000492571 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
TNFRSF9-203ENST00000492571 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
TNFRSF9-203ENST00000492571 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
TNFRSF9-203ENST00000492571 MAP3K15Q6ZN16 1313 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 TRAF5O00463 557 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 CELF2O95319 508 aaKnown RBP12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 GPTP24298 496 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 RGS19P49795 217 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 CST9Q5W186 159 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 BCL2L13Q9BXK5 485 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 GPRC5DQ9NZD1 345 aa12.89□□□□□ -0.35
TNFRSF9-203ENST00000492571 MYL6BP14649 208 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 TNIP1Q15025 636 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 HHIPL1Q96JK4 782 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
TNFRSF9-203ENST00000492571 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 AOC3Q16853 763 aa12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
TNFRSF9-203ENST00000492571 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms