RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 TNIP1Q15025 636 aa18.11■□□□□ 0.49
GPNMB-213ENST00000492512 SLC10A5Q5PT55 438 aa18.11■□□□□ 0.49
GPNMB-213ENST00000492512 MPNDQ8N594 471 aa18.11■□□□□ 0.49
GPNMB-213ENST00000492512 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
GPNMB-213ENST00000492512 LAMB2P55268 1798 aa18.11■□□□□ 0.49
GPNMB-213ENST00000492512 PDE4DIPQ5VU43 2346 aa18.1■□□□□ 0.49
GPNMB-213ENST00000492512 ANKRD36CQ5JPF3 1778 aa18.1■□□□□ 0.49
GPNMB-213ENST00000492512 KIAA2012Q0VF49 1180 aa18.1■□□□□ 0.49
GPNMB-213ENST00000492512 CDC37L1Q7L3B6 337 aa18.1■□□□□ 0.49
GPNMB-213ENST00000492512 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
GPNMB-213ENST00000492512 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
GPNMB-213ENST00000492512 DGKZQ13574 1117 aa18.09■□□□□ 0.49
GPNMB-213ENST00000492512 NFE2L2Q16236 605 aa18.09■□□□□ 0.49
GPNMB-213ENST00000492512 TRPM4Q8TD43 1214 aa18.09■□□□□ 0.49
GPNMB-213ENST00000492512 H7C1D1 291 aa18.08■□□□□ 0.48
GPNMB-213ENST00000492512 NOGQ13253 232 aa18.08■□□□□ 0.48
GPNMB-213ENST00000492512 CNOT7Q9UIV1 285 aaKnown RBP18.08■□□□□ 0.48
GPNMB-213ENST00000492512 TAF1P21675 1872 aa18.07■□□□□ 0.48
GPNMB-213ENST00000492512 TNRC18O15417 2968 aaPredicted RBP18.07■□□□□ 0.48
GPNMB-213ENST00000492512 HCLS1P14317 486 aaPredicted RBP18.07■□□□□ 0.48
GPNMB-213ENST00000492512 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
GPNMB-213ENST00000492512 HUNKP57058 714 aa18.07■□□□□ 0.48
GPNMB-213ENST00000492512 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
GPNMB-213ENST00000492512 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
GPNMB-213ENST00000492512 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
GPNMB-213ENST00000492512 PDIA6Q15084 440 aa18.06■□□□□ 0.48
GPNMB-213ENST00000492512 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
GPNMB-213ENST00000492512 USP48Q86UV5 1035 aa18.06■□□□□ 0.48
GPNMB-213ENST00000492512 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
GPNMB-213ENST00000492512 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 SHTN1A0MZ66 631 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 ANXA1P04083 346 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 GRAPQ13588 217 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 MICALL2Q8IY33 904 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
GPNMB-213ENST00000492512 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
GPNMB-213ENST00000492512 YDJCA8MPS7 323 aa18.04■□□□□ 0.48
GPNMB-213ENST00000492512 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
GPNMB-213ENST00000492512 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
GPNMB-213ENST00000492512 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
GPNMB-213ENST00000492512 TRMT112Q9UI30 125 aaKnown RBP18.04■□□□□ 0.48
GPNMB-213ENST00000492512 AIMP1Q12904 312 aaKnown RBP18.03■□□□□ 0.48
GPNMB-213ENST00000492512 TMC4Q7Z404 712 aa18.03■□□□□ 0.48
GPNMB-213ENST00000492512 PCDH10Q9P2E7 1040 aa18.03■□□□□ 0.48
GPNMB-213ENST00000492512 ZBTB12Q9Y330 459 aaPredicted RBP18.03■□□□□ 0.48
GPNMB-213ENST00000492512 SH3TC1Q8TE82 1336 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 DLK2Q6UY11 383 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 SAMD7Q7Z3H4 446 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 KRT26Q7Z3Y9 468 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 DPF2Q92785 391 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 DUOX1Q9NRD9 1551 aa18.02■□□□□ 0.48
GPNMB-213ENST00000492512 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.47
GPNMB-213ENST00000492512 LRRC37AA6NMS7 1700 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 PSMD14O00487 310 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 WASHC4Q2M389 1173 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 TBC1D10BQ4KMP7 808 aaPredicted RBP18.01■□□□□ 0.47
GPNMB-213ENST00000492512 RGMBQ6NW40 437 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 C2orf69Q8N8R5 385 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
GPNMB-213ENST00000492512 GBA2Q9HCG7 927 aaPredicted RBP18.01■□□□□ 0.47
GPNMB-213ENST00000492512 TCIRG1Q13488 830 aa18■□□□□ 0.47
GPNMB-213ENST00000492512 CCDC102AQ96A19 550 aa18■□□□□ 0.47
GPNMB-213ENST00000492512 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
GPNMB-213ENST00000492512 DCPSQ96C86 337 aaKnown RBP17.99■□□□□ 0.47
GPNMB-213ENST00000492512 DBNDD1Q9H9R9 158 aa17.99■□□□□ 0.47
GPNMB-213ENST00000492512 SAGE1Q9NXZ1 904 aa17.99■□□□□ 0.47
GPNMB-213ENST00000492512 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
GPNMB-213ENST00000492512 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
GPNMB-213ENST00000492512 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
GPNMB-213ENST00000492512 RIMBP2O15034 1052 aa17.98■□□□□ 0.47
GPNMB-213ENST00000492512 RPS12P25398 132 aaKnown RBP17.98■□□□□ 0.47
GPNMB-213ENST00000492512 ZNF157P51786 506 aaPredicted RBP17.98■□□□□ 0.47
GPNMB-213ENST00000492512 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
GPNMB-213ENST00000492512 RBM26Q5T8P6 1007 aaKnown RBP17.98■□□□□ 0.47
GPNMB-213ENST00000492512 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
GPNMB-213ENST00000492512 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
GPNMB-213ENST00000492512 ADM5C9JUS6 153 aa17.97■□□□□ 0.47
GPNMB-213ENST00000492512 EGFRP00533 1210 aa17.97■□□□□ 0.47
GPNMB-213ENST00000492512 RIPK4P57078 832 aa17.97■□□□□ 0.47
GPNMB-213ENST00000492512 ECE2O60344 883 aa17.96■□□□□ 0.47
GPNMB-213ENST00000492512 TRPA1O75762 1119 aa17.96■□□□□ 0.47
GPNMB-213ENST00000492512 SOX10P56693 466 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 DOK7Q18PE1 504 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 CELF1Q92879 486 aaKnown RBP17.95■□□□□ 0.46
GPNMB-213ENST00000492512 EYA3Q99504 573 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 KCNQ5Q9NR82 932 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
GPNMB-213ENST00000492512 GPSM2P81274 684 aa17.94■□□□□ 0.46
GPNMB-213ENST00000492512 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
GPNMB-213ENST00000492512 SULF1Q8IWU6 871 aa17.94■□□□□ 0.46
GPNMB-213ENST00000492512 RTL9Q8NET4 1388 aa17.93■□□□□ 0.46
GPNMB-213ENST00000492512 SLC10A3P09131 477 aa17.93■□□□□ 0.46
GPNMB-213ENST00000492512 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
GPNMB-213ENST00000492512 SF3B3Q15393 1217 aaKnown RBP17.93■□□□□ 0.46
GPNMB-213ENST00000492512 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
GPNMB-213ENST00000492512 GGA3Q9NZ52 723 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms