RNA–Protein interactions for RNA: ENST00000492472.1

RBM5-223, Transcript of RNA binding motif protein 5, human

TSL 2

Gene RBM5, Length 902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM5-223	ENST00000492472	NBPF15	Q8N660	670 aa		11.18	□□□□□ -0.62
RBM5-223	ENST00000492472	SMC1B	Q8NDV3	1235 aa		11.18	□□□□□ -0.62
RBM5-223	ENST00000492472	BABAM1	Q9NWV8	329 aa		11.18	□□□□□ -0.62
RBM5-223	ENST00000492472	TSPYL4	Q9UJ04	414 aa		11.18	□□□□□ -0.62
RBM5-223	ENST00000492472	NFKBIE	O00221	500 aa		11.17	□□□□□ -0.62
RBM5-223	ENST00000492472	RIPK4	P57078	832 aa		11.17	□□□□□ -0.62
RBM5-223	ENST00000492472	WDR43	Q15061	677 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
RBM5-223	ENST00000492472	ERFE	Q4G0M1	354 aa		11.17	□□□□□ -0.62
RBM5-223	ENST00000492472	CCDC93	Q567U6	631 aa		11.17	□□□□□ -0.62
RBM5-223	ENST00000492472	MAP3K15	Q6ZN16	1313 aa		11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	ALDH1B1	P30837	517 aa		11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	DDX10	Q13206	875 aa	Known RBP	11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	ZNF710	Q8N1W2	664 aa		11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	NGEF	Q8N5V2	710 aa		11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	RRP7A	Q9Y3A4	280 aa	Known RBP	11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM5-223	ENST00000492472	FAM177B	A6PVY3	158 aa		11.15	□□□□□ -0.62
RBM5-223	ENST00000492472	RIMBP2	O15034	1052 aa		11.15	□□□□□ -0.62
RBM5-223	ENST00000492472	MYL6B	P14649	208 aa		11.15	□□□□□ -0.62
RBM5-223	ENST00000492472	THUMPD2	Q9BTF0	503 aa	Known RBP	11.15	□□□□□ -0.62
RBM5-223	ENST00000492472	KLRG2	A4D1S0	409 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	TMPO	P42166	694 aa	Known RBP	11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	HLF	Q16534	295 aa		11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	PPP1R42	Q7Z4L9	355 aa		11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	RTKN2	Q8IZC4	609 aa		11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	RPGR	Q92834	1020 aa	Known RBP	11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	RIC1	Q4ADV7	1423 aa		11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	SCN4A	P35499	1836 aa		11.14	□□□□□ -0.63
RBM5-223	ENST00000492472	ANKRD36C	Q5JPF3	1778 aa		11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	IQCA1L	A6NCM1	817 aa		11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	GRIPAP1	Q4V328	841 aa		11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	PARP10	Q53GL7	1025 aa		11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	TMX4	Q9H1E5	349 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	ZBTB3	Q9H5J0	574 aa		11.13	□□□□□ -0.63
RBM5-223	ENST00000492472	EIF2S2	P20042	333 aa	Known RBP	11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	PRELP	P51888	382 aa		11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	HSP90AB3P	Q58FF7	597 aa		11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	CC2D2B	Q6DHV5	1058 aa		11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	RUNDC1	Q96C34	613 aa		11.12	□□□□□ -0.63
RBM5-223	ENST00000492472	RNF123	Q5XPI4	1314 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	TBC1D12	O60347	775 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	HOXB3	P14651	431 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	GPT	P24298	496 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	CAMK2B	Q13554	666 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	NEUROD2	Q15784	382 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	CRY2	Q49AN0	593 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	TTLL7	Q6ZT98	887 aa		11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	RBM17	Q96I25	401 aa	Known RBP	11.11	□□□□□ -0.63
RBM5-223	ENST00000492472	PCNT	O95613	3336 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	SLC34A2	O95436	690 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	MAP3K9	P80192	1104 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	NUTM1	Q86Y26	1132 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	CCDC146	Q8IYE0	955 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	C7orf43	Q8WVR3	580 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	JDP2	Q8WYK2	163 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	KLRG1	Q96E93	195 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	NLRP3	Q96P20	1036 aa		11.1	□□□□□ -0.63
RBM5-223	ENST00000492472	ABCC12	Q96J65	1359 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	HOXB7	P09629	217 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	CALD1	Q05682	793 aa	Known RBP	11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	ZNF34	Q8IZ26	560 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	DNAJC5G	Q8N7S2	189 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	KCNV2	Q8TDN2	545 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	PSMD1	Q99460	953 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	UTP14A	Q9BVJ6	771 aa	Known RBP	11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	EMILIN3	Q9NT22	766 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	LAS1L	Q9Y4W2	734 aa	Known RBP	11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	UBN2	Q6ZU65	1347 aa		11.09	□□□□□ -0.63
RBM5-223	ENST00000492472	DDN	O94850	711 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	NTSR2	O95665	410 aa		11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	HOXA10	P31260	410 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	IARS	P41252	1262 aa	Known RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	SUSD4	Q5VX71	490 aa		11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	FAM163A	Q96GL9	167 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	CRAMP1	Q96RY5	1269 aa		11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM5-223	ENST00000492472	CHL1	O00533	1208 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	PPEF1	O14829	653 aa	Predicted RBP	11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	SYNE4	Q8N205	404 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	PTCD2	Q8WV60	388 aa	Known RBP	11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	CHMP4A	Q9BY43	222 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	ADAMTS8	Q9UP79	889 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	PCDHGA4	Q9Y5G9	962 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	LAMB2	P55268	1798 aa		11.07	□□□□□ -0.64
RBM5-223	ENST00000492472	POTEC	B2RU33	542 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	EIF6	P56537	245 aa	Known RBP	11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	AIMP1	Q12904	312 aa	Known RBP	11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	PDIA6	Q15084	440 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	IFFO2	Q5TF58	517 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	HDGFL1	Q5TGJ6	251 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	COPS6	Q7L5N1	327 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	PNMA8A	Q86V59	439 aa	Predicted RBP	11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	LDHD	Q86WU2	507 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	GPC2	Q8N158	579 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	OXER1	Q8TDS5	423 aa		11.06	□□□□□ -0.64
RBM5-223	ENST00000492472	NECTIN2	Q92692	538 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms